DRSC/TRiP Functional Genomics Resources

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Protein Alignment UCHL1 and uchl1

DIOPT Version :10

Sequence 1:NP_004172.2 Gene:UCHL1 / 7345 HGNCID:12513 Length:223 Species:Homo sapiens
Sequence 2:NP_001011321.1 Gene:uchl1 / 496780 XenbaseID:XB-GENE-1000432 Length:234 Species:Xenopus tropicalis


Alignment Length:211 Identity:145/211 - (68%)
Similarity:177/211 - (83%) Gaps:0/211 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    13 LNKVLSRLGVAGQWRFVDVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSP 77
            |::||::|||...|:||||||.|:|||.:|..|.||:|||||||.||||||:.||:||:.::.:.
 Frog    24 LSEVLAQLGVLDGWKFVDVLGFEDESLSNVLTPVCAVLLLFPLTPQHENFRQSQIKELQEKDANK 88

Human    78 KVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMSPEDRAKCFEKNEAIQAA 142
            ||||:||||||||||:|||||.|||:|||.|.:.||||.|:.||..:|||:|||..||:|||::|
 Frog    89 KVYFLKQTIGNSCGTVGLIHAAANNKDKLNFAENSVLKNFIEETATLSPEERAKHLEKHEAIKSA 153

Human   143 HDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSEDTLLKDAAKVCREFTER 207
            |::||.|||||.:..||||||||..|||||||||||:|.||.|.|:||:||||||||:||:||||
 Frog   154 HNSVAAEGQCRENSDVNFHFILFTAVDGHLYELDGRLPSPVEHDATSEETLLKDAAKICRQFTER 218

Human   208 EQGEVRFSAVALCKAA 223
            ||||||||||||.|.|
 Frog   219 EQGEVRFSAVALSKCA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UCHL1NP_004172.2 Peptidase_C12_UCH_L1_L3 5..219 CDD:187737 141/205 (69%)
Interaction with ubiquitin. /evidence=ECO:0000269|PubMed:20439756 5..10
Interaction with ubiquitin. /evidence=ECO:0000269|PubMed:20439756 211..216 4/4 (100%)
uchl1NP_001011321.1 Peptidase_C12_UCH_L1_L3 24..230 CDD:187737 141/205 (69%)
Blue background indicates that the domain is not in the aligned region.

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