DRSC/TRiP Functional Genomics Resources

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Protein Alignment UCHL1 and uchl1

DIOPT Version :10

Sequence 1:NP_004172.2 Gene:UCHL1 / 7345 HGNCID:12513 Length:223 Species:Homo sapiens
Sequence 2:NP_958885.1 Gene:uchl1 / 325119 ZFINID:ZDB-GENE-030131-3844 Length:218 Species:Danio rerio


Alignment Length:224 Identity:149/224 - (66%)
Similarity:178/224 - (79%) Gaps:8/224 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQLKPMEINPEMLNKVLSRLGVAGQWRFVDVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKK 65
            |:.|||||||||||||||:|||..:||||||||||:|||..||:|.||::||||||.|||:||.|
Zfish     1 MEWKPMEINPEMLNKVLSKLGVGSKWRFVDVLGLEDESLSGVPSPCCAMMLLFPLTQQHEDFRSK 65

Human    66 Q-IEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMSPEDR 129
            | :.:.|      .|||:|||:.|||||:||:||||||||.:.|::.|.||:||..|..|||.:|
Zfish    66 QSVGDCK------DVYFLKQTVVNSCGTVGLVHAVANNQDSIDFDNNSALKKFLEATSGMSPAER 124

Human   130 AKCFEKNEAIQAAHDAVAQEGQCRVD-DKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSEDTL 193
            ||..|:|:|||..|||||.|||||.: ||||||||.|.||||.|||||||:..||:||.:..|:.
Zfish   125 AKELEQNKAIQETHDAVADEGQCRPEADKVNFHFITFVNVDGRLYELDGRIDGPVSHGPTKPDSF 189

Human   194 LKDAAKVCREFTEREQGEVRFSAVALCKA 222
            :.|||:|||||.|||:|||||||||||||
Zfish   190 VMDAARVCREFMEREKGEVRFSAVALCKA 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UCHL1NP_004172.2 Peptidase_C12_UCH_L1_L3 5..219 CDD:187737 142/215 (66%)
Interaction with ubiquitin. /evidence=ECO:0000269|PubMed:20439756 5..10 4/4 (100%)
Interaction with ubiquitin. /evidence=ECO:0000269|PubMed:20439756 211..216 4/4 (100%)
uchl1NP_958885.1 Peptidase_C12_UCH_L1_L3 3..215 CDD:187737 143/217 (66%)

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