DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment UBTF and HmgZ

DIOPT Version :10

Sequence 1:NP_055048.1 Gene:UBTF / 7343 HGNCID:12511 Length:764 Species:Homo sapiens
Sequence 2:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster


Alignment Length:104 Identity:25/104 - (24%)
Similarity:48/104 - (46%) Gaps:18/104 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   405 EKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKA---REAALKAQ 466
            ::||||:||..::..|.|.|::::.|....:::.:....:|..|.:|.:.:.||   :|...||.
  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAV 68

Human   467 SE---------------RKPGGEREERGKLPESPKRAEE 490
            .|               :|...:..::.|..||.:..||
  Fly    69 KEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEE 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBTFNP_055048.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
HMG-box_UBF1_rpt1-like 109..185 CDD:438814
HMG-box_UBF1_rpt2 196..270 CDD:438815
HMG-box_UBF1_rpt3 297..379 CDD:438816
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..411 3/5 (60%)
HMG-box_UBF1_rpt4 405..470 CDD:438817 19/82 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..487 8/42 (19%)
HMG_box_5 479..562 CDD:434287 5/12 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..576
HMG-box_UBF1_rpt6-like 565..650 CDD:438819
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 648..764
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 17/63 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.