DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBTF and Hmg-2

DIOPT Version :10

Sequence 1:NP_055048.1 Gene:UBTF / 7343 HGNCID:12511 Length:764 Species:Homo sapiens
Sequence 2:NP_611553.1 Gene:Hmg-2 / 37407 FlyBaseID:FBgn0026582 Length:376 Species:Drosophila melanogaster


Alignment Length:404 Identity:83/404 - (20%)
Similarity:151/404 - (37%) Gaps:105/404 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    86 TELILDAQEHVKNPYKGKKLKKHP------------------------DFPKKPLTPYFRFFMEK 126
            |..|.|..|  ..|.||||..|:|                        ..||.||..|.||..::
  Fly    28 TATIEDFDE--DKPAKGKKKAKNPKGRHSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDR 90

Human   127 RAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQN-- 189
            |.:..:..|:.:.|:.|:|:.:::.:|||::|:.||:...::|..::..|..|.::||:::.|  
  Fly    91 REELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLKEHPEIVANEL 155

Human   190 -----AKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHKA 249
                 |.|.|...|.|||:.                      :.:|||.      ||.     ||
  Fly   156 AKAKKATKLDGSPKEKTPKG----------------------ESALGKA------KKT-----KA 187

Human   250 LEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNS---------- 304
            ...:::.|:               .:.:..:.:.:|:..........|.:|||:|          
  Fly   188 KPVKRQSED---------------PDDVPLAKVKRAQTPPPPTPPAAPVQPPPSSVPPATPAPRP 237

Human   305 -----YSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLES 364
                 ..:|..|.:.:.:   |||..:...::.|...:::.....:..|..|..|...:....|.
  Fly   238 LQPGEIPIYTNEFIEHNR---STENELRTLRKAKTDLEQQNAVLEQHVDNTKAGYAKVMGEVTEL 299

Human   365 LPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGK--GGSEKPKRPVSAMFIFSEEKRRQLQE 427
            :  ||.||:....:.|......|....|..|.:..|.  |..:|..|.::.  :.::.....|.:
  Fly   300 M--EENQRLETYLRALRQKLVAALGGISMPPLEPSGPSVGNIDKYIRHLAG--LVTQPSNVTLIK 360

Human   428 ERPELSESELTRLL 441
            .|..|.:.:.:.||
  Fly   361 AREALRKVDTSSLL 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBTFNP_055048.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
HMG-box_UBF1_rpt1-like 109..185 CDD:438814 23/99 (23%)
HMG-box_UBF1_rpt2 196..270 CDD:438815 12/73 (16%)
HMG-box_UBF1_rpt3 297..379 CDD:438816 19/96 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..411 7/31 (23%)
HMG-box_UBF1_rpt4 405..470 CDD:438817 7/37 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..487
HMG_box_5 479..562 CDD:434287
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..576
HMG-box_UBF1_rpt6-like 565..650 CDD:438819
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 648..764
Hmg-2NP_611553.1 HMG-box_HMG20 75..154 CDD:438796 23/78 (29%)
Blue background indicates that the domain is not in the aligned region.

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