DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment UBTF and Ubtf

DIOPT Version :10

Sequence 1:NP_055048.1 Gene:UBTF / 7343 HGNCID:12511 Length:764 Species:Homo sapiens
Sequence 2:NP_001121162.1 Gene:Ubtf / 25574 RGDID:3927 Length:764 Species:Rattus norvegicus


Alignment Length:764 Identity:751/764 - (98%)
Similarity:763/764 - (99%) Gaps:0/764 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAFKDFSG 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAFKDFSG 65

Human    66 DMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKY 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 DMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKY 130

Human   131 AKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDI 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 AKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDI 195

Human   196 PEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIM 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 PEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIM 260

Human   261 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERM 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERM 325

Human   326 VLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSP 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
  Rat   326 VLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSP 390

Human   391 ASKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAK 455
            |||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   391 ASKKPSQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAK 455

Human   456 YKAREAALKAQSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWN 520
            |||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||
  Rat   456 YKAREAALKAQSERKPGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWN 520

Human   521 NMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSN 585
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   521 NMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSN 585

Human   586 GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYIS 650
            ||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||
  Rat   586 GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYIS 650

Human   651 NKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSE 715
            ||||:||||||||||||||||||||||||||:|::||:|::||||||||||||||||||||||||
  Rat   651 NKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDEEEEEDDENGDSSEDGGDSSESSSE 715

Human   716 DESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
            ||||||||||:||:|||||||||||||||||||||||||||||||||||
  Rat   716 DESEDGDENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBTFNP_055048.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 19/19 (100%)
HMG-box_UBF1_rpt1-like 109..185 CDD:438814 75/75 (100%)
HMG-box_UBF1_rpt2 196..270 CDD:438815 73/73 (100%)
HMG-box_UBF1_rpt3 297..379 CDD:438816 81/81 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..411 27/29 (93%)
HMG-box_UBF1_rpt4 405..470 CDD:438817 64/64 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..487 26/27 (96%)
HMG_box_5 479..562 CDD:434287 82/82 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..576 29/29 (100%)
HMG-box_UBF1_rpt6-like 565..650 CDD:438819 83/84 (99%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 648..764 106/115 (92%)
UbtfNP_001121162.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 19/19 (100%)
HMG-box_UBF1_rpt1-like 109..185 CDD:438814 75/75 (100%)
HMG-box_UBF1_rpt2 196..270 CDD:438815 73/73 (100%)
HMG-box_UBF1_rpt3 297..379 CDD:438816 81/81 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..411 38/40 (95%)
HMG-box_UBF1_rpt4 405..470 CDD:438817 64/64 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..488 30/31 (97%)
HMG_box_5 479..562 CDD:434287 82/82 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..576 29/29 (100%)
HMG-box_UBF1_rpt6-like 565..650 CDD:438819 83/84 (99%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 648..764 106/115 (92%)

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