DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBE3A and Smurf

DIOPT Version :10

Sequence 1:NP_000453.2 Gene:UBE3A / 7337 HGNCID:12496 Length:875 Species:Homo sapiens
Sequence 2:NP_523779.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster


Alignment Length:582 Identity:111/582 - (19%)
Similarity:190/582 - (32%) Gaps:158/582 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    36 RSQILGLPQ---AVPWREIQ----QWLP--FSPP-----VPIADYISQKRPQFLGSPFFCLRDP- 85
            :||.:..|.   |.|:|.::    ...|  |..|     ||:.   |..:|...|:....|||. 
  Fly   392 QSQTVATPNTVLATPFRSVRGPDGSATPGGFLTPASGAMVPVG---SGTQPHAPGATPNFLRDKL 453

Human    86 ---HRPGTGKCTKQVAFSDV--SLDFSQEEWACLGPAQRALYKDVMLENYSHLLSVAG-----LH 140
               ...|........|:...  .|..|.:|.....||.|..|:.|:.:|.:...:..|     ..
  Fly   454 NINTEDGMSVAETPAAYKSYQKQLKSSLKEGLASLPAPRNDYEIVVPDNETDEAADDGSMDVEQM 518

Human   141 IP-------KPQVISLLEQGKEPWMVGKELTRGLCSALESMCESKLLSLKKEVYELESCQREFMR 198
            :|       |.:...|.::.||..:..:.:.|.|...||  ..:.:|....|::.|...|:. ..
  Fly   519 VPDQADVDEKRKRNKLAQEAKELSLRSQVIQRDLPRPLE--INTTVLRPSNEMHGLTDLQKA-EE 580

Human   199 LTKQG----LDYPGFRDVLECGSQLQNGHGSQEPLAREYMPTFVQQTFLTLHQIINDEKPY---- 255
            |.||.    |:|...|:.::                 :..|..|::..|:.:|...::.||    
  Fly   581 LVKQEMVKMLNYDALRNPIQ-----------------QSQPASVKRPMLSQYQAYLEQHPYETID 628

Human   256 --ECKKCRKVFTQNSQFIQHQRIH--IGEKSY-----ECKECGKFFSCGSHVTR----------- 300
              |..:.||:.......::|...|  :..:||     ||.....:....:..||           
  Fly   629 EVELDEARKMLAAEMGVVKHGMAHGDLSLESYTQVWQECLSQVLYLPSQNRYTRANLASKKDRIE 693

Human   301 ----HLKIHTGEKPFECKDCGKAFSCSSYLSQHQRIHTGKKPYECKDCGKAFSYCSNLIDH---- 357
                .|:|:......|.|.|||       :.:..:|.|.......:...|.|...:..|:.    
  Fly   694 SAEKRLEINRKHMAKEAKRCGK-------IEKKLKILTAGYQARAQALVKQFQDTNEQIEQNSLA 751

Human   358 ------------------------------QRIHTGEKPYACKVCGKAFTKSSQLFQHVRVHTGE 392
                                          :|..|.:..||  ...:...:.:.|.:..||: |.
  Fly   752 LSTFKFLAAQEDLAIPKRLESLTEDVMRQTEREKTLQNRYA--QLTEELEELNHLLEEARVN-GV 813

Human   393 KPYECKECGKAFTQSSKLV----QHQRIHTGEKPY--------ECKECGKAFSSGSALTNHQRIH 445
            :.:|  |.||   :...||    :|:.:...|:|.        |.....:..|..:|..:....:
  Fly   814 QEHE--EGGK---EREPLVNGRLEHREVEEKEEPVVDNPTNGPEDSNVQEESSDSNAAEDEPPEN 873

Human   446 TGEKPYECKDCGKAFTQSSQLRQHQRIHAGEKPFECLECGKAFTQNSQLFQHQRV--HSDEK 505
            .||        |.|..|..|....:....|:...|..|......:|.:..|.:.:  |.||:
  Fly   874 EGE--------GNAVAQERQSESPEESVPGQDSCESEENTSEGQENQEQQQDEPMEQHDDEE 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBE3ANP_000453.2 AZUL 29..83 CDD:465173 14/60 (23%)
HECTc 523..873 CDD:238033
SmurfNP_523779.1 C2_Smurf-like 14..135 CDD:176028
PRP40 155..>283 CDD:227435
WW 169..198 CDD:459800
WW 514..546 CDD:197736 5/31 (16%)
WW 562..594 CDD:197736 9/32 (28%)
HECTc 702..1058 CDD:238033 44/249 (18%)
Blue background indicates that the domain is not in the aligned region.

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