DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBE3A and eel-1

DIOPT Version :10

Sequence 1:NP_000453.2 Gene:UBE3A / 7337 HGNCID:12496 Length:875 Species:Homo sapiens
Sequence 2:NP_001294472.1 Gene:eel-1 / 177084 WormBaseID:WBGene00022069 Length:4185 Species:Caenorhabditis elegans


Alignment Length:774 Identity:196/774 - (25%)
Similarity:317/774 - (40%) Gaps:189/774 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   140 CREREDYSPLIRVI----GRVFSSAEALVQSFRKVKQHTK--EELKSLQAKDEDKDEDEKEKAAC 198
            |:|.:  .|.:.|:    |..::...|| |:..||:.|.|  .:.|:.:|||.:|...|||..:.
 Worm  3559 CKELQ--LPAVTVLTDKGGAQYALLSAL-QTLVKVRNHMKAIRKDKAKRAKDAEKKLKEKETPST 3620

Human   199 SA-AAMEEDSEASSSRIGDSSQGDNN--------LQKLGPDDVSVDIDAIRRVYTRLLSNEKIET 254
            || ||....:.|.::.....:..:||        |:::..::        .|:..||.|.|.:..
 Worm  3621 SAPAAPAAPATAPTAPAAPDAPVENNEVPEPAAELEEVNDEE--------PRISERLSSLESLWN 3677

Human   255 AFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFIIVMENRNLHSPEYLEMALPLFCKAMSKLPLA 319
            :....|:.|..            :.||:.:                   :||....:|...:..:
 Worm  3678 SLSECLLRLGK------------ASDPHAV-------------------LALQPAAEAFFLVHAS 3711

Human   320 AQGKLIRLWSKYNADQIRRMMETFQQLITYKVISNEFNSRNLVNDDDAIVAASKCLKMVYYANVV 384
            .|.||    ...:|:..|:..:                            |||...     |..|
 Worm  3712 QQNKL----KAKDAEAKRKESQ----------------------------AASSSA-----AAAV 3739

Human   385 GGEVDTNHNEEDDEEPIPESSELTLQELLGEERRNKKGPRVDPLETELGVKTLDCRKPLIPFEEF 449
            ...|..:...||                            :||          |..| ||.|.|.
 Worm  3740 ASSVSHDGLRED----------------------------LDP----------DTAK-LIEFAEK 3765

Human   450 INEPLNEVLEMDKDYTFFKVETENKFSFMT-CPFILNAVTKNLGLYYDNRIRMYSERRITVLYSL 513
            ..:.||:.|..:...    :.....|:.:| .|.:|:...|          |.|..:.:|.|.. 
 Worm  3766 HRQVLNQALRQNNAV----LSAGGPFAILTQFPKLLDFDVK----------RKYFRKELTKLEP- 3815

Human   514 VQGQQLNPYLR----LKVRRDHIIDDA---LVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVS 571
             ...::..|.|    ::|.|:.:..|:   |.||      .|::.|.:.|:.|:||:|.|.||:.
 Worm  3816 -SNSRMPRYRRNDVSVQVSRNRVFSDSFRELFRL------RPSEWKNRFYIIFQGEEGQDAGGLL 3873

Human   572 KEFFQLVVEEIFNPDIGMF--------TYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCI 628
            :|:|.::..|||||:..:|        || ...|..:.||...:   .|..:|.::..:::.:..
 Worm  3874 REWFSVITREIFNPNYALFITAPGDMVTY-MINKASYINPEHLD---YFKFVGRLIAKSVFEHKY 3934

Human   629 LDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQIS-QTDLFGNPM 692
            ||.:|....|:.::.....::||....|..::||..||:   |..||:.:....| :.:.||...
 Worm  3935 LDCYFTRAFYKHILNLPVRYQDLESEDPAFFKSLDFLLQ---NPIDDLALDLTFSTEVEEFGVRS 3996

Human   693 MYDLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIEL 757
            :.|||.||.||.:.:.|:.|:|.|.....:..|:.||..||..||:.:..:. |..:|..:|:||
 Worm  3997 VRDLKPNGRKIEVNDANKDEYVKLVCQMKMTGSIRKQLDAFLTGFYEIIPKD-LISMFNEQELEL 4060

Human   758 LICGSRNLDFQALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGK 822
            ||.|...:|...:...|:|. |:.:.|..|:.||..:.||..|.|..||||.|||.:.|:.|...
 Worm  4061 LISGLPTVDIDDMAANTDYK-GFQKTSTHIQWFWRALRSFEKEDKAKFLQFVTGTSKVPLQGFAS 4124

Human   823 L-------KMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAI-TYAKGFG 873
            |       |..|..:....:|||.:|||||.|.||:|.|.|||::.||.|| ...:|||
 Worm  4125 LEGMNGVQKFSIHMDSRGGDRLPAAHTCFNQLDLPQYESYEKLRQSLLLAIRECTEGFG 4183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBE3ANP_000453.2 AZUL 29..83 CDD:465173
HECTc 523..873 CDD:238033 120/373 (32%)
eel-1NP_001294472.1 DUF908 95..375 CDD:428721
DUF913 576..935 CDD:461803
UBA_VP13D 1442..1476 CDD:270491
WWE 1787..1846 CDD:460715
PRK12323 <2950..3132 CDD:481241
UBM 2980..3009 CDD:464159
UBM 3050..3080 CDD:464159
HECTc 3830..4183 CDD:238033 119/367 (32%)
Blue background indicates that the domain is not in the aligned region.

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