DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment UBE3A and oxi-1

DIOPT Version :10

Sequence 1:NP_000453.2 Gene:UBE3A / 7337 HGNCID:12496 Length:875 Species:Homo sapiens
Sequence 2:NP_499392.1 Gene:oxi-1 / 176515 WormBaseID:WBGene00003898 Length:1066 Species:Caenorhabditis elegans


Alignment Length:901 Identity:199/901 - (22%)
Similarity:353/901 - (39%) Gaps:251/901 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    71 KALE--LYK------INAKLCDPHPSKKGASSAYL---------------ENSKGAPNNSCSEIK 112
            |.||  ||:      ::...|.....|.|.:...|               :.::||..|...::|
 Worm   315 KTLESKLYEWTWAVGVSLSRCTELTVKHGGTKTSLHYWHPVFGHYLLPIDKRTEGALRNVLFQLK 379

Human   113 M--NKKGARIDFKDVTYLTEEKVYEILELCRERED----YSPLIRVIGRVFSSAEALVQSFRK-- 169
            |  :.:..|..|.::...|:...:.:.:..:..:|    :|.|.|.:|....||.:..:|..:  
 Worm   380 MLWSSRVVRCLFGNIMENTKTASFSVTDGQKNSKDISAAFSKLWRKLGGSTDSASSSSKSESEPP 444

Human   170 ----------------VKQHTKEELKSLQAKDED---------KDEDEKEKAACSAAAMEEDSEA 209
                            ...|.|.|:.|...:|:.         ::..||             :..
 Worm   445 PTLIAIVCQVYMTALNTMVHMKGEIISGLCRDDQLLKQLWTYLREWGEK-------------AGG 496

Human   210 SSSRIGDSSQGDNNLQKLGPDDVSVDIDAIRRVYTRLLSNEKIETAFLNALVYLSPNVECDLTYH 274
            :|..|.:||    |.::.||  ||..:.:::|       .....||.|...|..:..:...|...
 Worm   497 TSGSIFNSS----NAEQWGP--VSASLQSLKR-------PSSPHTATLRLFVDCAAAIISILDEE 548

Human   275 NVYSRDPNYLNLFIIVMENRNLHS-PEYLEMALPLFCKAMSKLPLAAQGKLIRLWSKYNADQIRR 338
            .::.::..:        .|:.|.| .:|:.    :||             ...:||....:....
 Worm   549 EIFEKETPF--------SNKELESICKYVN----IFC-------------FRSIWSGAVDETSAN 588

Human   339 MMETFQQLITYKVISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVDTNHNEEDDEEPIPE 403
            ....|..:.:...:..|.:||.....:|:        |....:.|                   :
 Worm   589 TTGLFHSMHSLLTVLYERDSRRSFAANDS--------KFWLISEV-------------------K 626

Human   404 SSELTLQELLGEERRNKKGPRVDPLETELGVKTLDCRK--PLIPFEEFINEPLNEVLEMDKDYTF 466
            .|.||::    .|:::.||             .|..||  .|:|.:             |:...|
 Worm   627 PSSLTIE----YEKKSGKG-------------VLMMRKMAHLVPIK-------------DRMLLF 661

Human   467 FKVETENKFSFMTCPFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLR--LKVRR 529
            .:...::|          |.|..:|.                           :|.::  :.|:|
 Worm   662 RRQVQDDK----------NRVATSLN---------------------------DPQMQTWITVQR 689

Human   530 DHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVS-----KEFFQLVVEEIFNPDIGM 589
            :.||:|....|..:.:  || ||..:.|:|..|||:||.|:.     |||.:|.::::|:|.:.:
 Worm   690 NRIIEDGFNHLSKLTI--PA-LKSTIRVKFVNEQGLDEAGIDQDGVFKEFLELTLKKVFDPQLNL 751

Human   590 FTYDESTKLFWFNPSSFETEGQ---FTLIGIVLGLAIYNNCILDVHFPMVVYRKLMG--KKGTFR 649
            |: ..||.:.:.:|:|...:..   ||.:|.:||.|:|...::||....|:...::|  :...|.
 Worm   752 FS-TTSTGVLYPSPTSSLHDDHLALFTFVGRMLGKAVYEGIVVDVQLAPVLLAAVLGSHRLCAFD 815

Human   650 DLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFV 714
            :|....|.||:||..:..|||.:. |:.:||.:.: |..|.....||..:|..|.:||||:.::|
 Worm   816 ELSQLDPELYRSLTFVKRYEGEMA-DLSLTFSVDE-DFMGKISTVDLVPSGRTISVTNENKIDYV 878

Human   715 NLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICG-SRNLDFQALEETTEYDG 778
            :..:.:.:.:..::|.|||..|...:...:.|. ||.|.:::.||.| :.::|...|:...:|.|
 Worm   879 HRMAHHRVFRRTQEQCKAFVTGMQSILQPTWLS-LFAPNDLQCLISGVNSDIDLADLKRNVQYFG 942

Human   779 GYTRDSVLIREFWEIV-HSFTDEQKRLFLQFTTGTDRAPVGGLGKLK------------------ 824
            |:..:..||:..|:|: :.||.|:::|||:|.|...|.||.|...|:                  
 Worm   943 GFHGNHRLIKWLWDILENKFTSEERKLFLKFVTSCSRPPVLGFSYLEPPFSIRCVEVSDDQDQGD 1007

Human   825 --------MIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGF 872
                    .:..:.|....||||:.||||:|.||.|:.|..|.|:|..||....||
 Worm  1008 TLGSVVRGFLALRKGTAATRLPTASTCFNLLKLPNYNKKSLLLEKLRYAIHAGTGF 1063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBE3ANP_000453.2 AZUL 29..83 CDD:465173 5/19 (26%)
HECTc 523..873 CDD:238033 119/390 (31%)
oxi-1NP_499392.1 HECTc 684..1064 CDD:238033 119/387 (31%)

Return to query results.
Submit another query.