DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBE3A and etc-1

DIOPT Version :10

Sequence 1:NP_000453.2 Gene:UBE3A / 7337 HGNCID:12496 Length:875 Species:Homo sapiens
Sequence 2:NP_495842.1 Gene:etc-1 / 174388 WormBaseID:WBGene00008429 Length:1001 Species:Caenorhabditis elegans


Alignment Length:888 Identity:206/888 - (23%)
Similarity:362/888 - (40%) Gaps:207/888 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    58 PTFLRMDNNAAAIKALEL---YKINAKLCDPHPSKKGASSAYLENSKGAPNNSCSEIKMNKKGAR 119
            ||.....|...|:|::::   :|:..::.:  .:.....|.::.......|....::|..     
 Worm   245 PTSPNFTNLFEAMKSVDILNNWKVRPEIAE--TASLRLQSIFVSQIVHVSNTQSEDVKQY----- 302

Human   120 IDFKDVTYLTEEKVYEILELCREREDYSPLIRVIGRVFSSAEALVQSFRKVKQHTKEELKSLQAK 184
              |..:....|.. .:|:.....:||.|.    .||:.:|..      ..:||:.:|.|.|    
 Worm   303 --FNSLAVFLEHH-SKIMRSLNVKEDLSE----FGRLRTSVN------NHLKQYCEEMLIS---- 350

Human   185 DEDKDEDEKEKAACSAAAMEEDSEASSSRIGDSSQGDNNLQKLGPDDVSVD-IDAIRRVYTRLLS 248
                  :|..:|||..|                     ||     ..|.|: |.::|:.:::.|.
 Worm   351 ------NEFRRAACIYA---------------------NL-----PGVQVETIISLRKYFSQFLD 383

Human   249 NEKIETAFLNAL----VYLSPNVECDLTYHNVYSRDP--NYLNLFIIVMENRNL----------- 296
            .......|:.||    ..|.||.|.|    .:.::.|  |.|.||...:..|..           
 Worm   384 LLAASNTFVEALYAFIARLCPNGEFD----PIDAKSPKVNALELFCNCLNKRVSSVADSDFVPTD 444

Human   297 ------HSPEYL-EMALPLFCKAMSKLPLAAQGKLIRLWSKYNADQIRRM--METFQQLITYKVI 352
                  |:.|:| ::::.|.   ....|..|:|.|      |:.:...:|  .||..:.:|..|.
 Worm   445 IFVDFDHTVEFLRDVSIKLI---HLMFPTMARGDL------YSGNLKEKMYKAETDWKDVTESVF 500

Human   353 SNEFNSRNLVNDDDAIVAA--SKCLKMVYYANVVGGEVDTNHNEEDDEEPIPESSELTLQELLGE 415
            |              |:.|  .|.:::.|:..    |..|||..|             :...:||
 Worm   501 S--------------ILGAIYQKDIRLKYFPE----EFWTNHGRE-------------VLSGIGE 534

Human   416 ERR--NKKGPRVDPLETELGVKTLDCRKPLIPFEEFINEPLNEVLEMDKDYTFFKVETENKFSFM 478
            .||  .::.|. ..|:.|   :|:|        .||: |.|..:.|||.|     .|.:::....
 Worm   535 HRRMPRRRMPN-GRLQIE---RTMD--------TEFV-ERLAAIYEMDSD-----SENDDEDEDN 581

Human   479 TCPFILN---AVTKNLGLY--YDNRIRMYS-------ERRITVLYSL-VQGQQLNPYLRLKVRRD 530
            ..|.:|.   .|.|::...  :.:|:::::       |:..|..:.: ..|..:.      ||||
 Worm   582 NLPAVLRRAICVMKHIPFIVPFMDRVKLFTRLLNQDKEKHYTSTFGMGFNGPSVT------VRRD 640

Human   531 HIIDDALVRLEMIAM----ENPADLKKQLYVEF-----EGEQGVDEGGVSKEFFQLVVEEIFNPD 586
            .:..||   .|..|.    :...|||..:.|:.     ..|.|:|.||:.:||...:::..||.:
 Worm   641 QVYMDA---FETFAPKMQGDKVNDLKSMVRVKMVNWAGMNESGIDGGGIFREFLSELLKTAFNVE 702

Human   587 IGMFTYDESTKLFWFNPSS-----FETEGQFTLIGIVLGLAIYNNCILDVHFP----MVVYRKLM 642
            .|.||:.|| ||.:.||::     .:....|..||.::|..||...:.:|.|.    ..::....
 Worm   703 RGFFTFTES-KLLYPNPTAPFLLGVDCLAHFQFIGRMIGKLIYERQLQEVRFAEFFIAQIFETDK 766

Human   643 GKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITN 707
            .|....:.:....|::::.||.|.:......|::.:.|.:..:|: |.....:||.||.|..:|.
 Worm   767 NKDVDLQHMKSFDPIIFKHLKALQKMNNRELDELQLDFSVVTSDM-GLVRNVNLKPNGSKFRVTV 830

Human   708 ENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEE 772
            ||..|:|.||.:|.|.:.:.....|.|:|...:.:...:: :|.|.|::::|.|...: |.|.|.
 Worm   831 ENVHEYVRLYVNYHLKQRIASMVDAVRKGISEIISIEWMR-MFAPHELQIMIAGYEEV-FTAKEL 893

Human   773 ----TTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLK----MIIAK 829
                ...:..| |:|......||:::...:::.|:..|:|.||..||||.|...::    :::..
 Worm   894 RKFCELRFAAG-TQDINYEEMFWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQPRMGVLVIP 957

Human   830 NGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGF 872
            :..|  .||||.||.|:|.:|:||::.||:|:|..||....||
 Worm   958 SSDD--ELPTSATCMNMLRIPKYSNRTKLEEKLRYAINSGAGF 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBE3ANP_000453.2 AZUL 29..83 CDD:465173 6/27 (22%)
HECTc 523..873 CDD:238033 107/376 (28%)
etc-1NP_495842.1 IQCG-IQCD 19..>47 CDD:483958
HECTc 661..998 CDD:214523 97/343 (28%)
Blue background indicates that the domain is not in the aligned region.

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