DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment UBC and Nedd8

DIOPT Version :10

Sequence 1:NP_066289.3 Gene:UBC / 7316 HGNCID:12468 Length:685 Species:Homo sapiens
Sequence 2:NP_609919.1 Gene:Nedd8 / 35151 FlyBaseID:FBgn0032725 Length:84 Species:Drosophila melanogaster


Alignment Length:79 Identity:45/79 - (56%)
Similarity:61/79 - (77%) Gaps:0/79 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.|.|||||||.|.:::||:|.::.:|.::::||||||.||||||:|||:.|.:|.:||.:|..|
  Fly     1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGS 65

Human    66 TLHLVLRLRGGMQI 79
            .|||||.||||..|
  Fly    66 VLHLVLALRGGDSI 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBCNP_066289.3 Ubl_ubiquitin 1..76 CDD:340501 42/74 (57%)
Ubl_ubiquitin 77..152 CDD:340501 1/3 (33%)
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
Ubl_ubiquitin 533..608 CDD:340501
Ubl_ubiquitin 609..684 CDD:340501
Nedd8NP_609919.1 Ubl_NEDD8 3..76 CDD:340504 41/72 (57%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.