DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBB and RpS27A

DIOPT Version :10

Sequence 1:NP_061828.1 Gene:UBB / 7314 HGNCID:12463 Length:229 Species:Homo sapiens
Sequence 2:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster


Alignment Length:153 Identity:86/153 - (56%)
Similarity:96/153 - (62%) Gaps:32/153 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

Human   142 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 206
            |||||||||||.:                     :..|......:.|...::::..|        
  Fly    66 TLHLVLRLRGGAK---------------------KRKKKNYSTPKKIKHKRKKVKLA-------- 101

Human   207 TLSDYNIQKESTLHLVLRLRGGC 229
            .|..|.:.:...:|   |||..|
  Fly   102 VLKYYKVDENGKIH---RLRREC 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBBNP_061828.1 Ubl_ubiquitin 1..76 CDD:340501
Ubl_ubiquitin 77..152 CDD:340501 74/74 (100%)
Ubl_ubiquitin 153..228 CDD:340501 9/74 (12%)
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 74/74 (100%)
Ribosomal_S27 103..147 CDD:460261 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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