DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBB and ubi1

DIOPT Version :10

Sequence 1:NP_061828.1 Gene:UBB / 7314 HGNCID:12463 Length:229 Species:Homo sapiens
Sequence 2:NP_594398.1 Gene:ubi1 / 2541768 PomBaseID:SPAC11G7.04 Length:128 Species:Schizosaccharomyces pombe


Alignment Length:96 Identity:76/96 - (79%)
Similarity:80/96 - (83%) Gaps:15/96 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||:|||:|||||||||||||||||||||||||||||||||||||
pombe     1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

Human    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 96
            |||||||||||:               :|||
pombe    66 TLHLVLRLRGGI---------------IEPS 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBBNP_061828.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ubl_ubiquitin 77..152 CDD:340501 3/20 (15%)
Ubl_ubiquitin 153..228 CDD:340501
ubi1NP_594398.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ribosomal_L40e 79..126 CDD:395807 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.

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