DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBB and Ubb

DIOPT Version :10

Sequence 1:NP_061828.1 Gene:UBB / 7314 HGNCID:12463 Length:229 Species:Homo sapiens
Sequence 2:NP_620250.3 Gene:Ubb / 192255 RGDID:621562 Length:305 Species:Rattus norvegicus


Alignment Length:228 Identity:228/228 - (100%)
Similarity:228/228 - (100%) Gaps:0/228 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

Human    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Human   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195

Human   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
            |||||||||||||||||||||||||||||||||
  Rat   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBBNP_061828.1 Ubl_ubiquitin 1..76 CDD:340501 74/74 (100%)
Ubl_ubiquitin 77..152 CDD:340501 74/74 (100%)
Ubl_ubiquitin 153..228 CDD:340501 74/74 (100%)
UbbNP_620250.3 Ubl_ubiquitin 1..76 CDD:340501 74/74 (100%)
Ubl_ubiquitin 77..152 CDD:340501 74/74 (100%)
Ubl_ubiquitin 153..228 CDD:340501 74/74 (100%)
Ubl_ubiquitin 229..304 CDD:340501 228/228 (100%)

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