DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBB and ubq-1

DIOPT Version :10

Sequence 1:NP_061828.1 Gene:UBB / 7314 HGNCID:12463 Length:229 Species:Homo sapiens
Sequence 2:NP_741157.1 Gene:ubq-1 / 175840 WormBaseID:WBGene00006727 Length:838 Species:Caenorhabditis elegans


Alignment Length:228 Identity:225/228 - (98%)
Similarity:225/228 - (98%) Gaps:0/228 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
 Worm     1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

Human    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            |||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
 Worm    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Human   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            ||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
 Worm   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 195

Human   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
            |||||||||||||||||||||||||||||||||
 Worm   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBBNP_061828.1 Ubl_ubiquitin 1..76 CDD:340501 73/74 (99%)
Ubl_ubiquitin 77..152 CDD:340501 73/74 (99%)
Ubl_ubiquitin 153..228 CDD:340501 73/74 (99%)
ubq-1NP_741157.1 Ubl_ubiquitin 1..76 CDD:340501 73/74 (99%)
Ubl_ubiquitin 77..152 CDD:340501 73/74 (99%)
Ubl_ubiquitin 153..228 CDD:340501 73/74 (99%)
Ubl_ubiquitin 229..304 CDD:340501 225/228 (99%)
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
Ubl_ubiquitin 533..608 CDD:340501
Ubl_ubiquitin 609..684 CDD:340501
Ubl_ubiquitin 685..760 CDD:340501
Ubl_ubiquitin 761..836 CDD:340501
Blue background indicates that the domain is not in the aligned region.

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