DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBA52 and RpS27A

DIOPT Version :10

Sequence 1:XP_016882687.2 Gene:UBA52 / 7311 HGNCID:12458 Length:163 Species:Homo sapiens
Sequence 2:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster


Alignment Length:98 Identity:80/98 - (81%)
Similarity:85/98 - (86%) Gaps:4/98 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 72
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

Human    73 TLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRK 105
            |||||||||||    :.::..:.|:..|.|..|
  Fly    66 TLHLVLRLRGG----AKKRKKKNYSTPKKIKHK 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBA52XP_016882687.2 Ubl_ubiquitin 8..83 CDD:340501 74/74 (100%)
Ribosomal_L40e 86..161 CDD:395807 4/20 (20%)
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 74/74 (100%)
Ribosomal_S27 103..147 CDD:460261
Blue background indicates that the domain is not in the aligned region.

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