DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBA52 and RpL40

DIOPT Version :10

Sequence 1:XP_016882687.2 Gene:UBA52 / 7311 HGNCID:12458 Length:163 Species:Homo sapiens
Sequence 2:NP_476776.1 Gene:RpL40 / 33629 FlyBaseID:FBgn0003941 Length:128 Species:Drosophila melanogaster


Alignment Length:156 Identity:125/156 - (80%)
Similarity:126/156 - (80%) Gaps:28/156 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     8 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 72
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

Human    73 TLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKYVCSDAWGAVGAAGVGVCPHPPLLSLCRCYAR 137
            ||||||||||||||||||.||||||||||||||                            ||||
  Fly    66 TLHLVLRLRGGIIEPSLRILAQKYNCDKMICRK----------------------------CYAR 102

Human   138 LHPRAVNCRKKKCGHTNNLRPKKKVK 163
            |||||.||||||||||||||||||:|
  Fly   103 LHPRATNCRKKKCGHTNNLRPKKKLK 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBA52XP_016882687.2 Ubl_ubiquitin 8..83 CDD:340501 74/74 (100%)
Ribosomal_L40e 86..161 CDD:395807 44/74 (59%)
RpL40NP_476776.1 Ubl_ubiquitin 1..76 CDD:340501 74/74 (100%)
Ribosomal_L40e 79..126 CDD:395807 44/74 (59%)

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