DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TYK2 and Tyk2

DIOPT Version :9

Sequence 1:NP_001372133.1 Gene:TYK2 / 7297 HGNCID:12440 Length:1257 Species:Homo sapiens
Sequence 2:NP_001244276.1 Gene:Tyk2 / 100361294 RGDID:2320469 Length:1186 Species:Rattus norvegicus


Alignment Length:1247 Identity:942/1247 - (75%)
Similarity:1026/1247 - (82%) Gaps:78/1247 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    12 SKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFAL 76
            ||..|..|||:...|.|.|||||.||.|||||||||:.||||||:||||||||||||||.|||||
  Rat    17 SKADGTEAQPLVPTGRLMVLLHWPGPEGGEPWVTFSQPSLTAEEMCIHIAHKVGITPPCLNLFAL 81

Human    77 FDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGM 141
            :||||:|||||||:|:..:||:|.||||:||||||||||||:||||||||.||.|.|||...||:
  Rat    82 YDAQAKVWLPPNHVLDTSQDATLRLYFRMRFYFRNWHGMNPQEPAVYRCGFPGAETSSDHAEQGV 146

Human   142 QLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVA 206
            ||||.||||||||||||||:|||.||.:||:||||||||||||||||||||||||..|:||||:|
  Rat   147 QLLDSASFEYLFEQGKHEFMNDVVSLRDLSSEEEIHHFKNESLGMAFLHLCHLALNRGVPLEEMA 211

Human   207 KKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFG 271
            ::.|||:|||.|||:|||||:.|||||||.||||||:.||||.||||:|||||||||||||||||
  Rat   212 REISFKNCIPHSFRQHIRQHNVLTRLRLRRVFRRFLQAFQPGHLSQQVVMVKYLATLERLAPRFG 276

Human   272 TERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKE 336
            :|.:|||||.:|||.|.:||||::||....|||||.|:||.||||||||||||||.|::    .:
  Rat   277 SEHIPVCHLEVLAQPERDPCYIQNSGQTTGDPGPELASGPATHEVLVTGTGGIQWRPLQ----TQ 337

Human   337 EGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNK 401
            :...|.|..|||.|..|||.||.::....|..|:||.|.|||||:||:||||||..|.||.||||
  Rat   338 DSERGHSRGNPQGSQSGKKPKAPESGEHLAGSPQEPPWTYFCDFQDISHVVLKERRVHIHLQDNK 402

Human   402 CLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRP 466
            ||.|.|.|:|.|||||:||||||||||||||||||||||||||.||::||||||::|||||||.|
  Rat   403 CLLLCLCSQAEALSFVALVDGYFRLTADSSHYLCHEVAPPRLVTSIQNGIHGPLMDPFVQAKLWP 467

Human   467 EDGLYLIHWSTSHPYRLILTVAQRSQAP-DGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELG 530
            |||||||.|||||.:|||||||.|:.|. :|.:.||||||||.||.|||||:||||||.|:.:|.
  Rat   468 EDGLYLIQWSTSHLHRLILTVAHRNPASRNGPRGLRLRKFPITQQPGAFVLDGWGRSFDSLGDLR 532

Human   531 AALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHL 595
            .|||||.||||||||.|..||||:|.|.|||:||||:||..|.|||||||||||.|.||||||||
  Rat   533 QALQGCSLRAGDDCFPLHHCCLPRPREISNLVIMRGSRAHTRPLNLSQLSFHRVHQDEITQLSHL 597

Human   596 GQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETAS 660
            |||||||||||.|.|   |.|.|||:|...|..|.|..||:||||||||||||||||||||||||
  Rat   598 GQGTRTNVYEGLLSV---GGPNEGKVDSGCPSGPDRGSGQQLRVVLKVLDPSHHDIALAFYETAS 659

Human   661 LMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYL 725
            |||||||.||||:|||||||.|||:|.|:||||||||||||:||.|||.||||||||||||||||
  Rat   660 LMSQVSHMHLAFLHGVCVRGSENIIVAEFVEHGPLDVWLRRQRGRVPMPWKMVVAQQLASALSYL 724

Human   726 ENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANS 790
            |:||||||||||||||||||||.|||:|||||||||||.||||||||||||||.|||||.|||||
  Rat   725 EDKNLVHGNVCGRNILLARLGLEEGTNPFIKLSDPGVGQGALSREERVERIPWTAPECLSGGANS 789

Human   791 LSTAMDKWGFGATLLEICFDGEAPLQSRSPSEVCLGDPWALPAVGAPPRNPEDRIRAQSCIPSGL 855
            |.||.|.|||||||||||||||||||.|.|||                                 
  Rat   790 LGTATDMWGFGATLLEICFDGEAPLQGRGPSE--------------------------------- 821

Human   856 VTSSLSGLPAGGPLAGAQCSPSLFRSLWKSLVPGTQKKEHFYQRQHRLPEPSCPQLATLTSQCLT 920
                                                 ||.||.::|:|||||||:|||||.|||:
  Rat   822 -------------------------------------KERFYTKKHQLPEPSCPELATLTRQCLS 849

Human   921 YEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYC 985
            |||.|||||||||||||||||.||....|||.||||||||||||||||:||||||||||||||||
  Rat   850 YEPAQRPSFRTILRDLTRLQPQNLVGTSTVNSDSPASDPTVFHKRYLKRIRDLGEGHFGKVSLYC 914

Human   986 YDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 1050
            |||.||||||||||||||..||||.||||::||:||||||||||:|||||||||||||:||||||
  Rat   915 YDPNNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 979

Human  1051 VPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 1115
            ||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   980 VPLGSLRDYLPRHSVGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 1044

Human  1116 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE 1180
            ||||||||||||||||||||||||||||||.||||||||||||||||||||:|||||||||||:|
  Rat  1045 KAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSSQSPPTKFIE 1109

Human  1181 LIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 1245
            |||:.|||||||||||||||||||||||:||||:|||||||||:||||||||:||:|||||..||
  Rat  1110 LIGVTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWESEASFRPTFQNLVPILKTAQEK 1174

Human  1246 YQGQAPSVFSVC 1257
            ||||.|||||||
  Rat  1175 YQGQVPSVFSVC 1186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TYK2NP_001372133.1 FERM_F1 28..125 CDD:408179 78/96 (81%)
FERM_F2 143..266 CDD:408177 99/122 (81%)
Jak1_Phl 285..432 CDD:407742 90/146 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..366 11/30 (37%)
SH2 437..534 CDD:417686 70/97 (72%)
PKc_like 589..937 CDD:419665 231/347 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 610..629 8/18 (44%)
PTKc_Tyk2_rpt2 962..1244 CDD:270664 259/281 (92%)
Tyk2NP_001244276.1 FERM_F1 33..130 CDD:408179 78/96 (81%)
FERM_F2 148..271 CDD:408177 99/122 (81%)
Jak1_Phl 290..433 CDD:407742 90/146 (62%)
SH2 438..536 CDD:417686 70/97 (72%)
PKc_like 591..866 CDD:419665 231/347 (67%)
PTKc_Tyk2_rpt2 891..1173 CDD:270664 259/281 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83678634
Domainoid 1 1.000 541 1.000 Domainoid score I6054
eggNOG 1 0.900 - - E2759_KOG0197
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20712
Inparanoid 1 1.050 1941 1.000 Inparanoid score I1565
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG47769
OrthoDB 1 1.010 - - D20872at9347
OrthoFinder 1 1.000 - - FOG0001105
OrthoInspector 1 1.000 - - oto138010
orthoMCL 1 0.900 - - OOG6_100013
Panther 1 1.100 - - LDO PTHR45807
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X669
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1717.310

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