DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TWIST1 and dimm

DIOPT Version :9

Sequence 1:NP_000465.1 Gene:TWIST1 / 7291 HGNCID:12428 Length:202 Species:Homo sapiens
Sequence 2:NP_001260674.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster


Alignment Length:193 Identity:56/193 - (29%)
Similarity:78/193 - (40%) Gaps:56/193 - (29%)


- Green bases have known domain annotations that are detailed below.


Human     6 SSSPVSPA---DDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAGGGAGPGGAAGGGVGGGDEPG 67
            ||.||..|   ...|||:..:.:.....|        :|...|.|||:..||      |.....|
  Fly    45 SSRPVRRATRRTSQLSNNTYDLEMTDSSS--------QSDDTSGGGGSSNGG------GSTTNTG 95

Human    68 SPAQGKRGKKSAGCGGGGGAGGGGG---SSSGGGSPQSY-------------------------- 103
            .|         :||..||....|.|   .:|.|..|.:.                          
  Fly    96 HP---------SGCSLGGQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNANGNASRRRKGALNA 151

Human   104 EELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQS 165
            :|...:|:.:|.|||.|..|||:||.:||::||.:..: :||||:||.||..||..|..::.|
  Fly   152 KERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHIILS 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TWIST1NP_000465.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..105 28/130 (22%)
HLH 109..159 CDD:278439 25/50 (50%)
Sufficient for transactivation activity. /evidence=ECO:0000250 161..191 1/5 (20%)
dimmNP_001260674.1 HLH 154..208 CDD:238036 25/53 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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