DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF736 and syd-9

DIOPT Version :9

Sequence 1:NP_001164376.1 Gene:ZNF736 / 728927 HGNCID:32467 Length:427 Species:Homo sapiens
Sequence 2:NP_001362162.1 Gene:syd-9 / 180985 WormBaseID:WBGene00044068 Length:554 Species:Caenorhabditis elegans


Alignment Length:105 Identity:35/105 - (33%)
Similarity:48/105 - (45%) Gaps:11/105 - (10%)


- Green bases have known domain annotations that are detailed below.


Human   147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKDCRLFSDFTRHKKIHTVERCYKCEECGKAFK 211
            |.:|.:.|....:..:|:.:|..:|.........|..:..|           |.:.||.|||||:
 Worm    22 CPQCPKSFSSTKLLQQHQQMFHTDKSVLLSLKSTDAPVGMD-----------RAFICETCGKAFR 75

Human   212 KFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNH 251
            ..|||.||:.|||..|||.|:.|||:......|.||...|
 Worm    76 FRSNLAEHRSVHTALKPYVCKFCGKSSRLKGNLTKHILKH 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF736NP_001164376.1 KRAB 4..63 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 147..167 CDD:275368 4/19 (21%)
C2H2 Zn finger 175..195 CDD:275368 2/19 (11%)
C2H2 Zn finger 203..223 CDD:275368 12/19 (63%)
zf-H2C2_2 215..240 CDD:290200 14/24 (58%)
COG5048 <227..383 CDD:227381 11/25 (44%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
zf-H2C2_2 244..268 CDD:290200 4/8 (50%)
C2H2 Zn finger 259..279 CDD:275368
zf-H2C2_2 271..294 CDD:290200
C2H2 Zn finger 287..307 CDD:275368
C2H2 Zn finger 315..335 CDD:275368
zf-H2C2_2 327..352 CDD:290200
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
zf-H2C2_2 383..407 CDD:290200
C2H2 Zn finger 399..419 CDD:275368
syd-9NP_001362162.1 C2H2 Zn finger 22..43 CDD:275368 4/20 (20%)
zf-C2H2 65..87 CDD:333835 12/21 (57%)
C2H2 Zn finger 67..87 CDD:275368 12/19 (63%)
zf-C2H2 93..115 CDD:333835 8/21 (38%)
C2H2 Zn finger 95..115 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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