DRSC/TRiP Functional Genomics Resources

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Protein Alignment TUBB2A and gammaTub23C

DIOPT Version :9

Sequence 1:NP_001060.1 Gene:TUBB2A / 7280 HGNCID:12412 Length:445 Species:Homo sapiens
Sequence 2:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster


Alignment Length:457 Identity:156/457 - (34%)
Similarity:268/457 - (58%) Gaps:22/457 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVD 67
            ||:.:|.||||||||.:||:.:..||||.|:|.....::..|:|.:|::.:|..:.|:|||:|:|
  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLD 68

Human    68 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCL 130
            |||..::::....:.:::.|:|....:  .|||||||.| |::|.:|.:.|.|::.:|::..|.|
  Fly    69 LEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSL 132

Human   131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPS-PKVSDTVVEPYNATLSVHQLVE 194
            :||.|.||:.||||||||:.::.::.:.||.:::.||||.|: .::||.||:|||:.|::.:|..
  Fly   133 EGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTT 197

Human   195 NTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
            ..|....:||.||..|....|.:..|::..:|:|||..||..||.||:|..:|.:|..|...::|
  Fly   198 AADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIP 262

Human   260 FPRLHFFMPGFAPLTSRG---SQQ---YRALTVPELTQQMFDSKNMMAACDP---RHGRYLTVAA 315
            .|:|||.|.|:.||||..   :||   .|..||.::.:::...||||.:..|   .|..|:::..
  Fly   263 TPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILN 327

Human   316 IFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSATFIGNSTAIQEL 377
            |.:|.:...:|.:.:..::::..:.|:.|.|.:::.|:....|   ...::|...:.|.|:|..|
  Fly   328 IIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSL 392

Human   378 FKRISEQFTAMFRRKAFLHWYTGEGM---DEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEE 439
            |:|...|:..:.:|.|||..:..|.:   |..|..|:...::.||   |:|:.||.::..:|..:
  Fly   393 FERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLV---QEYEAATREDYMQFSVK 454

Human   440 EG 441
            .|
  Fly   455 RG 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUBB2ANP_001060.1 PLN00220 1..430 CDD:215107 153/444 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..445 6/20 (30%)
gammaTub23CNP_476804.1 PLN00222 1..451 CDD:215108 154/450 (34%)
gamma_tubulin 4..440 CDD:276957 151/439 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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