DRSC/TRiP Functional Genomics Resources

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Protein Alignment TTR and Ttr

DIOPT Version :10

Sequence 1:NP_000362.1 Gene:TTR / 7276 HGNCID:12405 Length:147 Species:Homo sapiens
Sequence 2:NP_036813.2 Gene:Ttr / 24856 RGDID:3916 Length:147 Species:Rattus norvegicus


Alignment Length:146 Identity:121/146 - (82%)
Similarity:135/146 - (92%) Gaps:0/146 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASHRLLLLCLAGLVFVSEAGPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFA 65
            |||.||.|||||||:|.|||||.|.||||||||||||||||||||::|||.||:|.||.:|||||
  Rat     1 MASLRLFLLCLAGLIFASEAGPGGAGESKCPLMVKVLDAVRGSPAVDVAVKVFKKTADGSWEPFA 65

Human    66 SGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAAL 130
            ||||:||||||||||:|:|.||:|:||:||||||||||||||||:|||||||||||.|.||||||
  Rat    66 SGKTAESGELHGLTTDEKFTEGVYRVELDTKSYWKALGISPFHEYAEVVFTANDSGHRHYTIAAL 130

Human   131 LSPYSYSTTAVVTNPK 146
            ||||||||||||:||:
  Rat   131 LSPYSYSTTAVVSNPQ 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TTRNP_000362.1 TR_THY 27..147 CDD:128406 101/120 (84%)
TtrNP_036813.2 TR_THY 27..147 CDD:128406 101/120 (84%)

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