DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TTR and CG30016

DIOPT Version :10

Sequence 1:NP_000362.1 Gene:TTR / 7276 HGNCID:12405 Length:147 Species:Homo sapiens
Sequence 2:NP_724982.1 Gene:CG30016 / 246393 FlyBaseID:FBgn0050016 Length:113 Species:Drosophila melanogaster


Alignment Length:103 Identity:27/103 - (26%)
Similarity:45/103 - (43%) Gaps:3/103 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    36 VLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK 100
            :||...|..|.||.|.|.|......|....:.:|...|... |....:|..||||:.....:|:.
  Fly    10 ILDTSVGKAAANVRVTVSRLDEIQEWRSLRAAQTDADGRCL-LLEPGQFPGGIYKLTFHVGAYYA 73

Human   101 ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYST 138
            ...:...:...:::...:::  :.|.|..||:|:.|||
  Fly    74 ERNVRTLYPAIDLIVDCSEN--QNYHIPLLLNPFGYST 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TTRNP_000362.1 TR_THY 27..147 CDD:128406 27/103 (26%)
CG30016NP_724982.1 hdxy_isourate 5..113 CDD:274364 27/103 (26%)

Return to query results.
Submit another query.