DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAPN5 and CalpC

DIOPT Version :10

Sequence 1:NP_001412250.1 Gene:CAPN5 / 726 HGNCID:1482 Length:680 Species:Homo sapiens
Sequence 2:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster


Alignment Length:614 Identity:166/614 - (27%)
Similarity:267/614 - (43%) Gaps:135/614 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    13 YSALRRDCRRRKVLFEDPLFPATDDSLYYKGTPGPAVRWKRPKYSGHSLAPHRPGWGDARRMENV 77
            |..:..|||.:.||:|||.|||...|::|..||....:||                    |:.::
  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWK--------------------RIMDL 49

Human    78 PRPGSSGCPSSSLRARDLGICEDPRLFVDGISSHDLHQGQVGNCWFVAACSSLASRESLWQKVIP 142
            ...||....::|..|         .:|::..:..|:..|::|:.|.|:....|:|..:|:.:|:|
  Fly    50 ADSGSGAVAANSSAA---------PVFLNESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVP 105

Human   143 DWKEQEWDPEKPNAYAGIFHFHFWRFGEWVDVVIDDRLPTVNNQLIYCHSNSRNEFWCALVEKAY 207
            .      |....:|: |:|.|..|..||||:|::||||||:|.:|.:....:.|.||.||:|||.
  Fly   106 A------DQTLASAH-GVFRFRLWWCGEWVEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAI 163

Human   208 AKLAGCYQALDGGNTADALVDFTGGVSEPIDLTEGDFANDETKRNQLFERMLKVHSRGGLISASI 272
            |||.|.|:||..|..:|.|.|..|||...:.:...:.      |.|..:.:|........::...
  Fly   164 AKLHGSYEALKYGTRSDGLTDLLGGVVRQMPILSDNI------RPQTLKELLTTTCIVTCLADKS 222

Human   273 KAVTAADMEARLACGLVKGHAYAVTDVRKVRLGHGLLAFFKSEKLDMIRLRN-----PWGER-EW 331
            ..|...::..|:..|::....|.::.:.||:...|       :.:.::.|::     |:||: .:
  Fly   223 ATVAKKNLAERMPNGILVNVNYRLSSLDKVKTLMG-------DSVQLVCLKDTFSSKPFGEKTHF 280

Human   332 NGPWSDTSEEWQKVSKSEREKMGVTVQDDGEFWMTFEDVCRYFT---------------DIIKCR 381
            .|.||..|:.|::||:.||.:: :.....||||::|.|....|:               :::|.|
  Fly   281 LGDWSPMSKTWERVSQVERARL-IRQLGPGEFWLSFCDFVEIFSTMEVVYLDTETSNDEEMLKSR 344

Human   382 VINTSHLSIHKTWEEARLHGAWTLHEDPRQNRG---GGCINHKDTFFQNPQYIFEVKKPEDEVLI 443
            .::         |:.....|.|        .||   |||.|| ::|..|||.:..| :.|.:::|
  Fly   345 PLH---------WKMKMHQGQW--------KRGVTAGGCRNH-ESFHINPQLLISV-QDEQDLVI 390

Human   444 CIQQRPKRSTRREGKGENLAIGFDIYKVEENRQYRMHSLQHK--------AASSIYINSRSVFLR 500
            .:.|.    |..|.|    .|||.:|..:  .:|.:.....|        ..:|.|.|:|.|...
  Fly   391 ALNQH----TAVEPK----VIGFTMYTWD--GEYMLSECLQKDFFKNHVSYLNSDYGNTRHVSYH 445

Human   501 TDQPEGRYVIIPTTFEPGHTGEFLLRVFTDVPSNCRELRLDEPPHTCWSSLCGYPQLVTQVHVLG 565
            |....|.||:||||:||.....|.:|:.     .....||     :|         |.||..:  
  Fly   446 THLEAGHYVLIPTTYEPAEEAHFTVRIL-----GTGSFRL-----SC---------LETQTMI-- 489

Human   566 AAGLKDSPTGANSYVIIKCEGDKVRSAVQ 594
               |.|......|....:|.|.||:|..|
  Fly   490 ---LLDPFPALKSTDAERCGGPKVKSVCQ 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPN5NP_001412250.1 Peptidase_C2 27..381 CDD:459889 100/374 (27%)
Calpain_III 392..538 CDD:238132 44/156 (28%)
C2_Calpain 555..678 CDD:176011 12/40 (30%)
CalpCNP_573118.2 CysPc 7..329 CDD:238004 104/371 (28%)
Calpain_III 346..483 CDD:238132 47/184 (26%)
EFh_PEF 515..680 CDD:355382 1/1 (100%)
EF-hand motif 515..543 CDD:320054 1/1 (100%)
EF-hand motif 556..585 CDD:320054
EF-hand motif 586..615 CDD:320054
EF-hand motif 622..650 CDD:320054
EF-hand motif 652..680 CDD:320054
Blue background indicates that the domain is not in the aligned region.

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