DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAPN5 and CalpC

DIOPT Version :9

Sequence 1:XP_011543527.1 Gene:CAPN5 / 726 HGNCID:1482 Length:680 Species:Homo sapiens
Sequence 2:NP_573118.2 Gene:CalpC / 32597 FlyBaseID:FBgn0260450 Length:681 Species:Drosophila melanogaster


Alignment Length:585 Identity:162/585 - (27%)
Similarity:260/585 - (44%) Gaps:117/585 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    53 YSALRRDCRRRKVLFEDPLFPATDDSLYYKGTPGPAVRWKRPKGICED-----------PRLFVD 106
            |..:..|||.:.||:|||.|||...|::|..||....:|||...:.:.           ..:|::
  Fly     5 YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAAPVFLN 69

Human   107 GISSHDLHQGQVGNCWFVAACSSLASRESLWQKVIPDWKEQEWDPEKPNAYAGIFHFHFWRFGEW 171
            ..:..|:..|::|:.|.|:....|:|..:|:.:|:|.      |....:|: |:|.|..|..|||
  Fly    70 ESAEFDVVPGKMGDRWLVSCLGLLSSLRNLFYRVVPA------DQTLASAH-GVFRFRLWWCGEW 127

Human   172 VDVVIDDRLPTVNNQLIYCHSNSRNEFWCALVEKAYAKLAGCYQALDGGNTADALVDFTGGVSEP 236
            |:|::||||||:|.:|.:....:.|.||.||:|||.|||.|.|:||..|..:|.|.|..|||...
  Fly   128 VEVLVDDRLPTINGRLAFMQPQASNCFWAALLEKAIAKLHGSYEALKYGTRSDGLTDLLGGVVRQ 192

Human   237 IDLTEGDFANDETKRNQLFERMLKVHSRGGLISASIKAVTAADMEARLACGLVKGHAYAVTDVRK 301
            :.:...:.      |.|..:.:|........::.....|...::..|:..|::....|.::.:.|
  Fly   193 MPILSDNI------RPQTLKELLTTTCIVTCLADKSATVAKKNLAERMPNGILVNVNYRLSSLDK 251

Human   302 VRLGHGLLAFFKSEKLDMIRLRN-----PWGER-EWNGPWSDTSEEWQKVSKSEREKMGVTVQDD 360
            |:...|       :.:.::.|::     |:||: .:.|.||..|:.|::||:.||.:: :.....
  Fly   252 VKTLMG-------DSVQLVCLKDTFSSKPFGEKTHFLGDWSPMSKTWERVSQVERARL-IRQLGP 308

Human   361 GEFWMTFEDVCRYFT---------------DIIKCRVINTSHLSIHKTWEEARLHGAWTLHEDPR 410
            ||||::|.|....|:               :::|.|.::         |:.....|.|       
  Fly   309 GEFWLSFCDFVEIFSTMEVVYLDTETSNDEEMLKSRPLH---------WKMKMHQGQW------- 357

Human   411 QNRG---GGCINHKDTFFQNPQYIFEVKKPEDEVLICIQQRPKRSTRREGKGENLAIGFDIYKVE 472
             .||   |||.|| ::|..|||.:..| :.|.:::|.:.|.    |..|.|    .|||.:|..:
  Fly   358 -KRGVTAGGCRNH-ESFHINPQLLISV-QDEQDLVIALNQH----TAVEPK----VIGFTMYTWD 411

Human   473 ENRQYRMHSLQHK--------AASSIYINSRSVFLRTDQPEGRYVIIPTTFEPGHTGEFLLRVFT 529
              .:|.:.....|        ..:|.|.|:|.|...|....|.||:||||:||.....|.:|:. 
  Fly   412 --GEYMLSECLQKDFFKNHVSYLNSDYGNTRHVSYHTHLEAGHYVLIPTTYEPAEEAHFTVRIL- 473

Human   530 DVPSNCRELRLDEPPHTCWSSLCGYPQLVTQVHVLGAAGLKDSPTGANSYVIIKCEGDKVRSAVQ 594
                .....||     :|         |.||..:     |.|......|....:|.|.||:|..|
  Fly   474 ----GTGSFRL-----SC---------LETQTMI-----LLDPFPALKSTDAERCGGPKVKSVCQ 515

Human   595  594
              Fly   516  515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPN5XP_011543527.1 CysPc 53..391 CDD:128526 103/369 (28%)
Calpain_III 394..533 CDD:279416 44/149 (30%)
C2_Calpain 555..678 CDD:176011 12/40 (30%)
CalpCNP_573118.2 CysPc 7..329 CDD:238004 100/342 (29%)
Calpain_III 346..483 CDD:238132 47/184 (26%)
FRQ1 <567..648 CDD:227455
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.920

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