DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TSC2 and gig

DIOPT Version :9

Sequence 1:XP_011520940.2 Gene:TSC2 / 7249 HGNCID:12363 Length:1879 Species:Homo sapiens
Sequence 2:NP_524177.1 Gene:gig / 40201 FlyBaseID:FBgn0005198 Length:1847 Species:Drosophila melanogaster


Alignment Length:1990 Identity:599/1990 - (30%)
Similarity:942/1990 - (47%) Gaps:440/1990 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    97 SKDSGLKEKFKILLGLGTPRPNPRSAEGKQTEFIITAEILRELSMECGLNNRIRMIGQICEV--- 158
            |||   |.|||:.|     :..|....|::|   :..|..|||..|..:..|.||:.::.:.   
  Fly     3 SKD---KSKFKLFL-----KSLPAGYVGERT---LRPEFERELRPEQPVAQRCRMLKELGDTQLH 56

Human   159 -------------------------AKTKKF----------EEGERLGVLRALFFKVIKDYPSNE 188
                                     |:|::.          .:.:.|.::|..||.||:::.:.|
  Fly    57 NFNLDESAITILFNLTNDLIVPNKPAETRQIALSFYKRLIHTQYKNLTIMREKFFLVIQNHEARE 121

Human   189 DLHERLEVFKALTDNGRHITYLEEELADFVLQWM----DVGLSSEFLLVLVNLVKFNSCYLD-EY 248
            ||...||:...|||||:.||..||::..|:|.|:    :..|.:.:|.:||||:|||:.:|| :.
  Fly   122 DLRHLLELLDTLTDNGKDITNFEEKIGKFMLLWIPAITEANLLTPYLDILVNLIKFNAAHLDKDI 186

Human   249 IARMVQMIC-LLCVRTASSVDIEVSLQVLDAVVCYNCLPAESLPLFIVTLCRTINVKELCEPCWK 312
            :..:||..| |.|..|.:.:.:: .|.:|:.|:.|...|:|.||..|.|||||:|....|...:|
  Fly   187 LVGIVQNACDLSCSVTVNEIGLQ-CLTILEMVIGYTIFPSEPLPQCITTLCRTVNHAPYCPSSFK 250

Human   313 LMRNLLGTHLGHSAIYNMCHLMEDRAYMEDAPLLRGAVFFVGMALWGAHRLYSLRNSP----TSV 373
            :|:|||||.||:.::..||.::.|||..:||.|||||||.:.|.::|::.::.:  ||    |:|
  Fly   251 IMKNLLGTQLGYHSMKMMCSILNDRALYDDAHLLRGAVFHLNMNIFGSNIIFQV--SPMTYATNV 313

Human   374 LPSFYQAMACPNEVVSYEIVLSITRLIKKYRKELQVVAWDILLNIIERLLQQLQTLDS------- 431
            |.:|.:|:.....:|::|::||:..:|.|  ::|..:.||::.:|:..::..::..:.       
  Fly   314 LTAFLRALDSRQVIVTFEVILSVRMVITK--RQLSEIIWDLICDIMSSIVSNIEYYEEVNINKDR 376

Human   432 -PELRTIVHDLLTTVEELC--DQNEFHGSQERYFELVERCADQRPESSLLNLISYRAQSIHPAKD 493
             ..|:...|:.:..:|:|.  |:::..|:.||.::|:||.||:|||:|:|.||.||::.:...:.
  Fly   377 LHHLQINFHENIDCIEKLLQQDRSQILGNVERIYDLIERVADRRPEASVLALIEYRSRRVTATRP 441

Human   494 GWIQNLQALMERFFRSESRGAVRIKVLDVLSFVLLINRQFYEEELINSVVISQLSHIPEDKDHQV 558
            .|:|.|...:.|::|. |...||||.::.|..::..||..||||:::.||:..||||..:...||
  Fly   442 DWLQVLAQFVRRYYRM-SNVNVRIKTIEALVQIMDQNRACYEEEILSRVVLVHLSHIHLESSVQV 505

Human   559 RKLATQLLVDLAEGCHTHHFNSLLDIIEKVMAR--------SLSPPPELEERDVAAYS--ASLED 613
            |....:.|.:.|..|.|.....||||:|.::.|        |.|....|.|......:  :.:.|
  Fly   506 RVAVARALSNFATHCDTKRCMDLLDILEALINRPFEHTRHGSSSGEGTLAEVTFGLVNNESEISD 570

Human   614 VKTAVLGLLVILQTKLYTLPASHATRVYEMLVSHIQLHYKHSYTLPIASSIRLQAFDFLLLLRAD 678
            :..||.||:.:...||:.||..||.:::.:|:.|::|||:........|.:|.:.|.:||..||:
  Fly   571 IIAAVDGLVKVFAIKLHRLPGIHALKIFNILMDHLELHYERPKIFEHISVVRYKIFAWLLKARAN 635

Human   679 SLHRLGLP-NKDGVVRFSPYCVCDYMEPERGSEKKTSGPLSPPTGPPGPAPAGPAVRLGSVPYSL 742
            ..:.:|.| ....||:||||...|             .||.|...|.            ::....
  Fly   636 GSYHIGYPEGSTEVVKFSPYLGID-------------SPLLPQAHPT------------AISIRR 675

Human   743 LFRVLLQCLKQESDWKVLKLVLGRLPESLRYKVLIFTSPCSVDQLCSAL--CSMLSGPKTLERLR 805
            :.:::::||:.::|::|.:||:..||:.|:.|.|:..:  .:::|.:.|  .:::|..|      
  Fly   676 VCKLIVRCLEHDTDYQVFQLVIRELPKVLQNKALVQGN--DIEELANTLLKINLVSNNK------ 732

Human   806 GAPEGFSR-TD-LHLAVVPVLTALISYHNYLDKTKQREMVYCLEQGLIHRCASQCVVALSICSVE 868
                 |.| || .|..|:|.:.:|:.||..|...:...::..|...::...||.|:..::|..:|
  Fly   733 -----FKRPTDEFHALVLPAIASLVIYHESLQPQQHYGIITALNSRVLTGIASVCINTMTILILE 792

Human   869 MPDIIIKALPVLVVKLTHISATASMAVPLLEFLSTLARL-PHLYRNFAAEQYASVFAISLPYTNP 932
            ||:.:::.||.::::::.:|.|.::|.|:|||||.|..| .||:.||.:.....||||:||||.|
  Fly   793 MPEALMRKLPDVLLQMSKMSDTNALATPVLEFLSLLIHLSKHLFANFTSMHNMYVFAITLPYTKP 857

Human   933 SKFNQYIVCLAHHVIAMWFIRCRLPFRKDFVPFITKGLRSNV------LLSFDDTPEKDSFRARS 991
            .:::.|.|.|||||||.||::|:|..|::.|.:|...::||.      :::.:...|..|.|.||
  Fly   858 HRYDHYTVSLAHHVIAGWFLKCKLELRRNCVNYIKSSIQSNAKMLSSDIVNLNSLNEDSSNRKRS 922

Human   992 TSLNERPKSLRIARPPKQGLNNSPPVKEFKESSAAEAFRCRSISVSEHVVRSRIQTSLTSASLGS 1056
            |||.||            |..|:           |.|:.                          
  Fly   923 TSLTER------------GSRNN-----------ANAWN-------------------------- 938

Human  1057 ADENSVAQADDSLKNLHLELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLV 1121
             |.....|.::.|:|.|.||.|||.|.:||:.:|...::|||.|..||||..|.::||||||.||
  Fly   939 -DLEMRPQMNNGLRNFHAELAETCFDFLARHTYSPCPSMPKRLPAAEFLLKDGVSQTWLVGNNLV 1002

Human  1122 TVTTSVGTGTRSLLGLDSGELQSG-----PESSSSPGVHV---------------RQTKEAPAKL 1166
            |:|||         |..|...:||     .:...:|.:.:               |:.:.....|
  Fly  1003 TITTS---------GCPSAPARSGLCERCAQLGKAPSISLNSKSLSDAAPPLSPERERRYTKVSL 1058

Human  1167 ESQAGQQVSRGARDRVRSMS------GGHGLR------VGALDVPA-----SQFLGSATSPGPRT 1214
            :..:|.: |.|:.:...|.|      |||..|      ..:||..:     .:.||||...|..|
  Fly  1059 QHSSGNE-SAGSTELTSSSSSNSAAAGGHPHRQISNSSTASLDALSRRGSNPEALGSALGEGAHT 1122

Human  1215 --------------APAAKPEKASAGTRVPVQEKTNLAAYVPLLTQGWAEILVRRPTGNTSWLMS 1265
                          :.:..|...|.     ||:...:.|     ..||||:||||||||.||:..
  Fly  1123 GSNTSLLGNSLSQSSVSMSPSSGSV-----VQQPVCVRA-----CTGWAEVLVRRPTGNVSWITR 1177

Human  1266 LENPLS--------PFSSDINNMPLQELSNALMAAERFKEHRDTALYKSLSVPAASTAKPPPLP- 1321
            ::||::        || :::.::.|......:...:           .::..|..:.|.|.|.| 
  Fly  1178 IQNPITNDCFGQELPF-NNVVSLFLPTAHGGVFGPD-----------NTIQAPPHTLADPEPEPE 1230

Human  1322 --------------RSNTVASFSSLYQSSCQGQLHRSVSWAGIASQREAVGCRAPLCLIDSAVVM 1372
                          ||..||...:|.:   |.::| ||...|..:........||          
  Fly  1231 AEVNAATAPQASALRSRMVAKARALQR---QEEIH-SVGGNGNGNGNGNGSGNAP---------- 1281

Human  1373 EEGSPGEVPV-LVEPPGLEDVEAALGMDRRTDAYSRSSSVSSQE--EKSLHAEELVGRG-IPIER 1433
            ..|....:|: .|...|....||||           ..|||..|  :.||..|:...|. .|:.|
  Fly  1282 STGGAAAIPIPRVPASGKRGKEAAL-----------CGSVSDGEADDDSLAFEDAQSRARNPVRR 1335

Human  1434 VVSSEGGRPSVDLSFQPS-----------QPLSKSSSSPE-LQTL-------------------- 1466
            |.||    |.:..|::.|           :|:..::..|: |.||                    
  Fly  1336 VNSS----PEMSSSWRQSFLTNKPTPLSQEPVKTTADEPQSLLTLKKKTVQYSTKDMRVSCEAIP 1396

Human  1467 QDILGD-PGDKADVGRLSPEVKARSQSGTLD------GESAAWSASGED---------------S 1509
            ::|.|. |..:|....|.||      ||||.      .:.::..|.|.:               |
  Fly  1397 EEIAGSTPPSQAAALALQPE------SGTLPPKQHSADDVSSHVAGGSNLQAGGSTLKLGKPPLS 1455

Human  1510 RGQP------------------EGPLPSSSPRSPSG--------------------LRPRGYTIS 1536
            .|||                  .|.|..||....:|                    :|.|..|||
  Fly  1456 PGQPPLLGTGRVTSFGGTSVPQPGALAKSSSSGSNGTNVGVITSDYDNGNNGNGDMMRGRSKTIS 1520

Human  1537 DSAPSRRGKRVERDALKSRATASNAEKVP-----GINPSFVFLQLYHSPFFGDESNKPILLPNES 1596
            .......|.  .|....|......|.|.|     .:||||:|:|||.:...| .:::|:.:..|:
  Fly  1521 VVREVNNGN--TRPPPASSFRNFGAAKPPINTKLCMNPSFIFMQLYTTGQLG-VTDEPLKVGPEN 1582

Human  1597 QSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLTGLGRLIELKDCQP 1661
            .|   :|.|:|.:|.::||||.|||||:||.|:|:.||.|.|||.||.|||..:|.|:.||:.:.
  Fly  1583 SS---AVSLIDLVPPFETHKIGVLYVGQGQCNNEVEILRNSHGSARYVEFLRNIGTLVSLKEAEQ 1644

Human  1662 DKVYLGGLDVCGEDGQFTYCWHDDIMQAVFHIATLMPTKDVDKHRC-DKKRHLGNDFVSIVYNDS 1725
            :.::: .||..|.||:|.|.|.|||:|..||:||||||...|...| :||.|:|||||.|:||:|
  Fly  1645 NNLFI-MLDRNGADGKFAYIWKDDILQVTFHVATLMPTNLQDDPNCNEKKSHIGNDFVKIIYNES 1708

Human  1726 GEDFKLGTIKGQFNFVHVIVTPLDYECNLVSLQCRKDMEGLVDTSVAKIVSDRNLPFVARQMALH 1790
            ||::.|.||.||||:..|||.|||...|.|.::.|.::...|..:..:|||||:.|.:|||||||
  Fly  1709 GEEYNLNTISGQFNYACVIVEPLDLNSNRVYVKARSEISKFVCHAEYRIVSDRSAPLLARQMALH 1773

Human  1791 ANMASQVHHS--RSNPTDIYPSKWIARLRHIKRLRQRICE 1828
            ||:||.|:.|  :.:|   |.|.|:.|||.:||||.::.|
  Fly  1774 ANLASLVYQSVQKKHP---YASNWLERLRKLKRLRSKLIE 1810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TSC2XP_011520940.2 None
gigNP_524177.1 DUF3384 40..467 CDD:288697 135/432 (31%)
HEAT repeat 484..515 CDD:293787 11/30 (37%)
Tuberin 566..882 CDD:281532 108/353 (31%)
Rap_GAP 1617..1802 CDD:280332 93/188 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144555
Domainoid 1 1.000 251 1.000 Domainoid score I2111
eggNOG 1 0.900 - - E1_KOG3687
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H462
Inparanoid 1 1.050 747 1.000 Inparanoid score I585
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47539
OrthoDB 1 1.010 - - D341431at2759
OrthoFinder 1 1.000 - - FOG0005485
OrthoInspector 1 1.000 - - oto88903
orthoMCL 1 0.900 - - OOG6_104155
Panther 1 1.100 - - LDO PTHR10063
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1559
SonicParanoid 1 1.000 - - X5077
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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