DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TSN and Trax

DIOPT Version :10

Sequence 1:NP_004613.1 Gene:TSN / 7247 HGNCID:12379 Length:228 Species:Homo sapiens
Sequence 2:NP_650454.2 Gene:Trax / 41871 FlyBaseID:FBgn0038327 Length:298 Species:Drosophila melanogaster


Alignment Length:237 Identity:51/237 - (21%)
Similarity:97/237 - (40%) Gaps:36/237 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    14 LAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG-TVKTHLTSLKT 77
            |..:.|..|.|.|:.:.:...::.|:.||..:....  |:..|...:||:... .:..:..::..
  Fly    41 LIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRK--QNKEKVLEEARQRLNKLIAVNFRAVAL 103

Human    78 KFPAEQYYRFHEHWRFVLQRLVFLAAFVVYL---------ETETLVTREAV-------------- 119
            :...:..|:|...:...||..:....::.||         ||:::...:|:              
  Fly   104 ELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSDWQAIQAVMQYVEESSQPK 168

Human   120 ---TE------ILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFIN 175
               ||      |..:|..::..|.:|..:|:.|:..|..||.|..:||:.:||....|.....:.
  Fly   169 EEPTEGEDVQAIAQVESPKKFQFFVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQ 233

Human   176 ELDSGFRLLNLKN-DSLRKRYDGLKYDVKKVEEVVYDLSIRG 216
            ...||:..||.:. ..|.::...:|..|.|.|.|.|::.:||
  Fly   234 HFYSGYISLNCQRARELWRKITTMKQSVLKAENVCYNVKVRG 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TSNNP_004613.1 Translin 10..216 CDD:271349 49/235 (21%)
DNA/RNA binding 86..90 1/3 (33%)
Leucine-zipper. /evidence=ECO:0000255 177..198 5/21 (24%)
TraxNP_650454.2 Translin-like 37..267 CDD:271348 47/227 (21%)

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