DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRPS1 and GATAe

DIOPT Version :9

Sequence 1:NP_054831.2 Gene:TRPS1 / 7227 HGNCID:12340 Length:1294 Species:Homo sapiens
Sequence 2:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster


Alignment Length:929 Identity:182/929 - (19%)
Similarity:295/929 - (31%) Gaps:377/929 - (40%)


- Green bases have known domain annotations that are detailed below.


Human   433 LDSSRQNGTEATSYYWCKFCSFSCESSSSLKLLEHYGKQH--------GAV----QSGGLNPELN 485
            |:||  ||.:          ..:.:::::|...:...:||        |.|    |:|...||  
  Fly    58 LESS--NGAD----------QLAQQTANNLDEQQEQQQQHQQQAATSVGVVVQTGQAGVSEPE-- 108

Human   486 DKLSRGSVINQN-----------DLAKSSEGETMTKTDKSSSGAKKKDFSSKGAEDNMVTSYNCQ 539
               .:..|:.:|           :|.::.|||..|....:|||:         |.|:.:      
  Fly   109 ---EQYVVVPRNQRRILTTAGTLELNEAREGEPSTNASNASSGS---------ASDSHI------ 155

Human   540 FCDFRYSKSHGPDVIVVGPLLRHYQQLHNIHKCTIKHCPFCPRGLCSPEKHLGEIT--------- 595
              :::.|....|..       .||.|:             .||.        .|:|         
  Fly   156 --EYQRSAHQSPGA-------THYVQM-------------APRN--------AEVTEQVGAAAGA 190

Human   596 -------YPFACRKSNCSHCALLLLHLSPG-AAGSSRVK---------HQCHQCSFTTPDVDVLL 643
                   ||..|...:.:  |:.:..|..| |.|.|:.:         .|..||  .||:     
  Fly   191 PPGTIFAYPIICNGDDVA--AIKIETLEKGEATGESQQQQQQLQQHQHQQQQQC--PTPN----- 246

Human   644 FHYESVHESQASDVKQEANHLQGSDGQQSVKESKEHSCTKCDFITQVEEEISRHYRRAHSCYKCR 708
                .....:...:..||..||....||...:.::|                   ::.|..::..
  Fly   247 ----GASYGETIVISSEAEALQHHHQQQQQHQQQQH-------------------QQQHHQHQAA 288

Human   709 QCSFTAADTQSLL--EHFNTVHCQEQDI--TTANGEEDGHAISTIKEEPKIDFRV---------- 759
            ..:..||.|..:.  .|..||....:|:  |||..|..  |.:...:.|.:|..|          
  Fly   289 AAASAAAQTVHIATSSHGGTVRFVTEDVRFTTAGPETS--ASNMYYDVPVVDGSVHANESKTYAD 351

Human   760 ----YNLLTPDS-----------KMGEPV------------SESVVKREKL-------------- 783
                |....|.|           :.|..:            |||.:.:..|              
  Fly   352 LGNAYAPFPPSSSFSSNSYAATLQQGNTIYSVPGTGQFLAKSESGLNQTGLLRQTGPATFQTISF 416

Human   784 EEKDGLKEKVWTESSSDDLRNVTWR----------GADILRGSPSYTQASLGLLTPVSGTQEQTK 838
            |..:|: |.:|...:..:.::|.:.          |:..:..|.....:|:|..           
  Fly   417 EGGNGI-EPLWASPAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHWPPASSIGQY----------- 469

Human   839 TLRDSPNVEAAHLARPIYGLAVET-------KG---FLQGAPAGGEKSGALPQQYPASGENKSKD 893
               |...|.|:..:.|.:.|..|.       ||   |....|       |..:..|...:.::|.
  Fly   470 ---DGSLVTASSTSSPNHELKCENCHGPFLRKGSEYFCPNCP-------AFMRMAPRITQRQAKP 524

Human   894 ESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPLNIIKQNNGEQII 958
            ::.:....|| :||.||||.|..|:|||:|..|..||||||||.|||:..|||::.|:.     |
  Fly   525 KAAAAPNNRR-NGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEG-----I 583

Human   959 RRRTRKRLNPEALQAEQLNKQQRGSNEEQVNGSPLERRSEDHLTESHQREIPLPSLSKYEAQGSL 1023
            ::|.||..|.                    .|:|:.|             .||||:|    ||..
  Fly   584 QKRKRKPKNN--------------------GGAPMHR-------------APLPSMS----QGVN 611

Human  1024 TKSHSAQQPVLVSQTLDIHKRMQPLHIQIKSPQES---------TGDPGNSSSVSEGKGSSERGS 1079
            ..::|...|..|..::        |:.|:.|.|.|         ||..|....||....::...:
  Fly   612 LMANSPLYPSQVPVSM--------LNSQLNSQQNSSPELHDMSTTGQAGGQRVVSISLNATAPPT 668

Human  1080 PIEKYMRPAKHPNYSPPGSPIEKYQYPLFGLPFVHNDFQSEADWLRFWSKYKLSVPGNPHYLSHV 1144
            |.......|:|                                                    ||
  Fly   669 PDGTLNMSARH----------------------------------------------------HV 681

Human  1145 PGLPNPCQNYVPYPTFNLP----PHFSAVGSDNDIPLDLAIKHSRPGPTANGASKEKTKAPPNVK 1205
            .|     :::.||...:.|    ||....     :|::..|  .:|.||...:....|:..|:| 
  Fly   682 TG-----ESHSPYSQQSTPQSQSPHLPGT-----VPINRQI--VQPVPTIESSRSSNTELTPSV- 733

Human  1206 NEGPLNVVKTEKVDRSTQD 1224
                  :.:|...:||:.:
  Fly   734 ------ITRTGLPERSSNN 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPS1NP_054831.2 ZnF_GATA 904..947 CDD:214648 26/42 (62%)
ZnF_GATA 908..964 CDD:238123 28/55 (51%)
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 29/54 (54%)
ZnF_GATA 538..589 CDD:238123 28/55 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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