DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRPC6 and trpc6a

DIOPT Version :10

Sequence 1:NP_004612.2 Gene:TRPC6 / 7225 HGNCID:12338 Length:931 Species:Homo sapiens
Sequence 2:XP_005161247.1 Gene:trpc6a / 563989 ZFINID:ZDB-GENE-040724-114 Length:874 Species:Danio rerio


Alignment Length:904 Identity:652/904 - (72%)
Similarity:736/904 - (81%) Gaps:61/904 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    24 RRNESQDYLLMDSELGEDGCPQAPLPCYGYYPCFRGSDNRLAHRRQTVLRE---KGRRLANRGPA 85
            :||.|:|.|||:...|||        |||.|..:.|         :.|.|:   |.||.|.||.|
Zfish    21 KRNRSKDNLLMNEHFGED--------CYGSYGNYHG---------ENVARQVLPKSRRQAVRGAA 68

Human    86 YMFSDRSTSLSIEEERFLDAAEYGNIPVVRKMLEECHSLNVNCVDYMGQNALQLAVANEHLEITE 150
            |||:....||:..|||||||||||||||||:||||...|:||||||||||||||||||||||:||
Zfish    69 YMFNGHPNSLTPLEERFLDAAEYGNIPVVRRMLEELPELDVNCVDYMGQNALQLAVANEHLEVTE 133

Human   151 LLLKKENLSRVGDALLLAISKGYVRIVEAILSHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTR 215
            |||||:||||:||||||||||||.|||||||||.|||:.:||..||||:.: .|||:||||||||
Zfish   134 LLLKKDNLSRIGDALLLAISKGYTRIVEAILSHKAFADSRRLTASPSQAPM-HDDFFAYDEDGTR 197

Human   216 FSHDVTPIILAAHCQEYEIVHTLLRKGARIERPHDYFCKCNDCNQKQKHDSFSHSRSRINAYKGL 280
            |||||||:|||:||.||||||.||.||||||:||||||.|:.||..||:|||.|||||||||:||
Zfish   198 FSHDVTPVILASHCHEYEIVHILLGKGARIEQPHDYFCTCDTCNYHQKYDSFCHSRSRINAYRGL 262

Human   281 ASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAI 345
            |||||||||:||||:.|||||||||.||||||||||:|:||||||||||||||||||:|||||||
Zfish   263 ASPAYLSLSNEDPVLAALELSNELASLANIEKEFKNEYRKLSMQCKDFVVGLLDLCRSTEEVEAI 327

Human   346 LNGDV-ETLQSGDHGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLV 409
            |||:. :||:.  .|||:|.|||||||||:|||||||||||||||||||:|..|||||.|:||||
Zfish   328 LNGEEDDTLEL--PGRPSLIRLKLAIKYELKKFVAHPNCQQQLLSIWYEHLPELRQQTTAIKFLV 390

Human   410 VLAVAIGLPFLALIYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNE 474
            ||.||:||||||::||.||||||||||||||:||||||||||||||||||||||||:|||||||.
Zfish   391 VLGVAMGLPFLAMVYWVAPCSKMGKIMRGPFLKFVAHAASFTIFLGLLVMNAADRFDGTKLLPNM 455

Human   475 TSTDNAKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAA 539
            |..|...|||||||:.|:||||||||||||||||||||||:|||:|||.|.||:|||||||||.|
Zfish   456 TIHDYPTQLFRMKTTPFTWMEMLIISWVIGMIWAECKEIWSQGPREYLLEPWNLLDFGMLAIFVA 520

Human   540 SFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAIAVV 604
            |||:|.|||||||.||..:|.:.|  |||.|.|...|.|:..|||.|.|||||::||||||||||
Zfish   521 SFISRIMAFWHASSAQRYVDEHYT--DLTNVVLPFEVGYFQRARIDWLPSDPQLVSEGLYAIAVV 583

Human   605 LSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAFT 669
            ||||||||||||||||||||||||||||||||||||||:||:|||||||||||||.|||||||||
Zfish   584 LSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYRGAKQNEAFT 648

Human   670 TVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEI 734
            |||||||||||||||||||||||:|..||||||||||||||||||:|||||||||||||:|||||
Zfish   649 TVEESFKTLFWAIFGLSEVKSVVVNNGHKFIENIGYVLYGVYNVTVVIVLLNMLIAMINNSFQEI 713

Human   735 EDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLKLKKWISELFQGHKKGFQEDA 799
            |||||||||||||||||:||||||||||||||:|||||:..|::.:|..:.|| ...:|...:.:
Zfish   714 EDDADVEWKFARAKLWFTYFEEGRTLPVPFNLIPSPKSVLSLVMGVKGLLREL-SVRQKAIMKGS 777

Human   800 EMNKINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFHLNSFNNPPRQYQKIMKRLIK 864
            |::::.:.|              :...|.:.       |||             :||||||||:|
Zfish   778 ELSELGQSK--------------TCQAKTLP-------RSS-------------RYQKIMKRLVK 808

Human   865 RYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLAELIRELGEKLSME 923
            ||:::||.|||.|||||||||||||||||||||||||||.|.|:||:|:|.|.:.||.:
Zfish   809 RYIIKAQNDKECDEVNEGELKEIKQDISSLRYELLEEKSHNMEELAKLVRTLEKNLSQD 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPC6NP_004612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 0/1 (0%)
trp 82..897 CDD:273311 614/815 (75%)
ANK 1 97..126 22/28 (79%)
ANK 2 132..161 26/28 (93%)
ANK repeat 132..159 CDD:293786 24/26 (92%)
ANK repeat 161..185 CDD:293786 21/23 (91%)
ANK 3 163..189 23/25 (92%)
ANK repeat 212..247 CDD:293786 29/34 (85%)
ANK 4 218..247 23/28 (82%)
trpc6aXP_005161247.1 TRPV 65..841 CDD:454755 614/815 (75%)
ANK repeat 76..113 CDD:293786 27/36 (75%)
ANK repeat 115..146 CDD:293786 27/30 (90%)
ANK repeat 194..228 CDD:293786 28/33 (85%)

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