DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRPC6 and Trpc6

DIOPT Version :10

Sequence 1:NP_004612.2 Gene:TRPC6 / 7225 HGNCID:12338 Length:931 Species:Homo sapiens
Sequence 2:XP_006509912.1 Gene:Trpc6 / 22068 MGIID:109523 Length:949 Species:Mus musculus


Alignment Length:931 Identity:871/931 - (93%)
Similarity:893/931 - (95%) Gaps:1/931 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSQSPAFGPRRGSSPRGAAGAAARRNESQDYLLMDSELGEDGCPQAPLPCYGYYPCFRGSDNRLA 65
            |||||.|..|||.|.:.|.||..|||||||||||| |||:||.||.|||.|||||.|||::|||.
Mouse    20 MSQSPRFVTRRGGSLKAAPGAGTRRNESQDYLLMD-ELGDDGYPQLPLPPYGYYPSFRGNENRLT 83

Human    66 HRRQTVLREKGRRLANRGPAYMFSDRSTSLSIEEERFLDAAEYGNIPVVRKMLEECHSLNVNCVD 130
            |||||:|||||||||||||||||:|.|||||||||||||||||||||||||||||||||||||||
Mouse    84 HRRQTILREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEECHSLNVNCVD 148

Human   131 YMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILSHPAFAEGKRLATS 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||
Mouse   149 YMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILNHPAFAEGKRLATS 213

Human   196 PSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKGARIERPHDYFCKCNDCNQ 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.:|:|
Mouse   214 PSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKGARIERPHDYFCKCTECSQ 278

Human   261 KQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQC 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||
Mouse   279 KQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYRKLSMQC 343

Human   326 KDFVVGLLDLCRNTEEVEAILNGDVETLQSGDHGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLSI 390
            ||||||||||||||||||||||||.||.|.||.||||||||||||||||||||||||||||||||
Mouse   344 KDFVVGLLDLCRNTEEVEAILNGDAETRQPGDFGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLSI 408

Human   391 WYENLSGLRQQTMAVKFLVVLAVAIGLPFLALIYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLG 455
            |||||||||||||||||||||||||||||||||||.|||||||||:|||||||||||||||||||
Mouse   409 WYENLSGLRQQTMAVKFLVVLAVAIGLPFLALIYWCAPCSKMGKILRGPFMKFVAHAASFTIFLG 473

Human   456 LLVMNAADRFEGTKLLPNETSTDNAKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKE 520
            |||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||
Mouse   474 LLVMNAADRFEGTKLLPNETSTDNARQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKE 538

Human   521 YLFELWNMLDFGMLAIFAASFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIK 585
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   539 YLFELWNMLDFGMLAIFAASFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIK 603

Human   586 WDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMI 650
            |||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   604 WDPTDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMI 668

Human   651 GMFNLYSYYIGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTM 715
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   669 GMFNLYSYYIGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTM 733

Human   716 VIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLKL 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.
Mouse   734 VIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLKF 798

Human   781 KKWISELFQGHKKGFQEDAEMNKINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFHL 845
            |||:.||.||.|:||||||||||.|||||.||.||||||||.||||.|:.||||.|.|||||:||
Mouse   799 KKWMCELIQGQKQGFQEDAEMNKRNEEKKFGISGSHEDLSKFSLDKNQLAHNKQSSTRSSEDYHL 863

Human   846 NSFNNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLA 910
            |||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   864 NSFSNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLA 928

Human   911 ELIRELGEKLSMEPNQEETNR 931
            ||||:|||:||:||..||:.|
Mouse   929 ELIRKLGERLSLEPKLEESRR 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPC6NP_004612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 14/24 (58%)
trp 82..897 CDD:273311 781/814 (96%)
ANK 1 97..126 28/28 (100%)
ANK 2 132..161 28/28 (100%)
ANK repeat 132..159 CDD:293786 26/26 (100%)
ANK repeat 161..185 CDD:293786 22/23 (96%)
ANK 3 163..189 24/25 (96%)
ANK repeat 212..247 CDD:293786 34/34 (100%)
ANK 4 218..247 28/28 (100%)
Trpc6XP_006509912.1 TRPV 100..915 CDD:454755 781/814 (96%)
ANK repeat 150..177 CDD:293786 26/26 (100%)
ANK repeat 179..203 CDD:293786 22/23 (96%)
ANK repeat 230..265 CDD:293786 34/34 (100%)

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