DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRPC4 and Trpgamma

DIOPT Version :10

Sequence 1:NP_003297.1 Gene:TRPC4 / 7223 HGNCID:12336 Length:982 Species:Homo sapiens
Sequence 2:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster


Alignment Length:901 Identity:427/901 - (47%)
Similarity:578/901 - (64%) Gaps:114/901 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    28 ELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSF 92
            :|:..||.:|.|||:||.|..::.|::|:....||:||:|||||||||:||:|||||::|||:::
  Fly    77 QLTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVDPLGRTALLMAIDNENLEMVELLINY 141

Human    93 NVYVGDALLHAIRKEVVGAVELLLNHK--------KPSGEKQVPPILLDKQFSEFTPDITPIILA 149
            ||...|||||:|.:|.|.|||:||:|:        ..|.|.      ..:..|.|||||||:|||
  Fly   142 NVDTKDALLHSISEEFVEAVEVLLDHENVTFHSEGNHSWES------ASEDTSTFTPDITPLILA 200

Human   150 AHTNNYEIIKLLVQKGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSE 214
            ||.:||||||:|:.:|..:|.||:|||.|.|||.|...|||||||||:|.|:||||||||||||:
  Fly   201 AHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSLRHSRSRINAYRALASPSLIALSSK 265

Human   215 DPFLTAFQLSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIE 279
            ||.||||:|||||:.||.:|:|||:||:||.:||:.||..|||.||:|.||||:||:.....:.|
  Fly   266 DPILTAFELSWELRRLSFLEHEFKNEYQELRKQCQDFATALLDHTRTSHELEILLNHDPTGPVYE 330

Human   280 EQSGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFS 344
            ......|.|||||||.|||:|||..|.||||||.||:..||:||::.|::.|....||::||:||
  Fly   331 HGERMHLNRLKLAIKLRQKKFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDIIRIGIMFPIFS 395

Human   345 VCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHI----------DRSDL------- 392
            :.|::||.|.:|..:||||||||||:|||.||||||:||||.|          |.|.:       
  Fly   396 LAYILAPYSSIGQTMRKPFIKFICHSASYFTFLFLLMLASQRIETFIGGWFFADSSGMLNTMEEL 460

Human   393 -NRQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAF 456
             .::|..||.:||:||.||.|.||.|:||:||.|||:|::|.||::|||.||||:||::|::|:|
  Fly   461 PTKRGAKPTFIEWLILAWVSGLIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVALRVVSF 525

Human   457 VK---------YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRM 512
            .:         ::...|||.||.|.|.|::|.||:.|||||||:|:.:|:.|.||||||:||.||
  Fly   526 FQVQKEMIYNSHATDLPRERWDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRM 590

Human   513 LLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCK---------GIRCEKQNNA------FS 562
            ::||:||.|:|.|||.||.:|||||.:||.:.:...|.         .:......||      ||
  Fly   591 VMDIMKFFFLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVSPMSALLNMNGTNDPNACIVWRRFS 655

Human   563 TLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLI 627
            .||||.|:|||::||||:|....:.....||.|.|..|||||:||::|||||:||||||:|||||
  Fly   656 NLFETTQTLFWAVFGLIDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLI 720

Human   628 ADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTI 692
            ::.||:||||||:|||:||||||||.|.|||:||:|||:||.|||:....|......:.|...||
  Fly   721 SERADVEWKFARSKLWISYFEEGGTCPPPFNIIPTPKSIWYAIKWMRRVFCSGSSAARREHLKTI 785

Human   693 GVRTQHRRAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLG 757
              |.:.::|:|   |..:||::|||||:|||....|.|:: :|:||::..|:|||||:||.|::.
  Fly   786 --RRKAQQASD---RDFKYQQIMRNLVRRYVTVEQRKAES-QGVTEDDVNEIKQDISAFRCELVE 844

Human   758 LLRGSKLSTIQSANASKESSNSADSDEKSDSEGNSKDKKKNFSLFDLTTLIHPRSAAIASERHNI 822
            :|:.|.:.|..:|.              ....|..|:::|...|.....:..|.           
  Fly   845 ILKNSGMDTNVTAG--------------QGGGGGKKNRQKERRLMKGFNIAPPG----------- 884

Human   823 SNGSALVVQEPPREKQRKVNFVTDIKNF-----------------GLFHRRSKQNA 861
            |.||...|.|          |.|.:.|:                 ...|:|.:..|
  Fly   885 STGSLAPVAE----------FSTSLDNYDNQHEILSSTLSTLFTPNFMHKRQQSQA 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPC4NP_003297.1 trp 17..754 CDD:273311 406/775 (52%)
ANK 1. /evidence=ECO:0000269|PubMed:39478185, ECO:0007744|PDB:8WPL, ECO:0007744|PDB:8WPM, ECO:0007744|PDB:8WPN 29..60 12/30 (40%)
ANK 2. /evidence=ECO:0000269|PubMed:39478185, ECO:0007744|PDB:8WPL, ECO:0007744|PDB:8WPM, ECO:0007744|PDB:8WPN 71..93 15/21 (71%)
ANK 3. /evidence=ECO:0000269|PubMed:39478185, ECO:0007744|PDB:8WPL, ECO:0007744|PDB:8WPM, ECO:0007744|PDB:8WPN 96..118 13/21 (62%)
ANK repeat 122..167 CDD:293786 23/44 (52%)
ANK 4. /evidence=ECO:0000269|PubMed:39478185, ECO:0007744|PDB:8WPL, ECO:0007744|PDB:8WPM, ECO:0007744|PDB:8WPN 141..165 17/23 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 767..795 3/27 (11%)
PDZ-binding domain. /evidence=ECO:0000269|PubMed:12154080 980..982
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 406/775 (52%)
ANK repeat 118..147 CDD:293786 19/28 (68%)
ANK repeat 175..217 CDD:293786 22/47 (47%)
TRP_CaM_bind1 865..>891 CDD:467881 7/36 (19%)
Blue background indicates that the domain is not in the aligned region.

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