DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRPC1 and trp

DIOPT Version :9

Sequence 1:NP_001238774.1 Gene:TRPC1 / 7220 HGNCID:12333 Length:793 Species:Homo sapiens
Sequence 2:NP_476768.1 Gene:trp / 43542 FlyBaseID:FBgn0003861 Length:1275 Species:Drosophila melanogaster


Alignment Length:788 Identity:286/788 - (36%)
Similarity:440/788 - (55%) Gaps:83/788 - (10%)


- Green bases have known domain annotations that are detailed below.


Human    42 EENTLN--EKLFLLACDKGDYYMVKKILEENSSGD-LNINCVDVLGRNAVTITIENENLDILQLL 103
            ||..|:  ||.|:|:|::||...|||||||....| .||||.|.:.|:|:...|||||.|::.:|
  Fly    25 EEYILSDVEKNFILSCERGDLPGVKKILEEYQGTDKFNINCTDPMNRSALISAIENENFDLMVIL 89

Human   104 LDYGCQSADALLVAIDSEVVGAVDILL-----NHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPV 163
            |::..:..||||.||..|.|.||:.||     ||   :..:|...:.::|.::   :.|:|:.|:
  Fly    90 LEHNIEVGDALLHAISEEYVEAVEELLQWEETNH---KEGQPYSWEAVDRSKS---TFTVDITPL 148

Human   164 ILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIML 228
            ||||||||||||.:||.:..:||.||.|.|.|..|......||||||:.|::.||.|::.:||.|
  Fly   149 ILAAHRNNYEILKILLDRGATLPMPHDVKCGCDECVTSQMTDSLRHSQSRINAYRALSASSLIAL 213

Human   229 TEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDE 293
            :..||:|.||:||.:||.|..:|.|||.:|.|:.:..:.|...||..||.|.||||:||.  :.|
  Fly   214 SSRDPVLTAFQLSWELKRLQAMESEFRAEYTEMRQMVQDFGTSLLDHARTSMELEVMLNF--NHE 276

Human   294 PLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVG 358
            |......|.:|..|.||||||:|.||.||:..|.||.|..:|:..:.|:|||...:::|.|:.:|
  Fly   277 PSHDIWCLGQRQTLERLKLAIRYKQKTFVAHPNVQQLLAAIWYDGLPGFRRKQASQQLMDVVKLG 341

Human   359 IFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSL----------------- 406
            ..:|:.||.|::||.|:..:.:..||:|||.|..||..||:||...||                 
  Fly   342 CSFPIYSLKYILAPDSEGAKFMRKPFVKFITHSCSYMFFLMLLGAASLRVVQITFELLAFPWMLT 406

Human   407 VYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFA 471
            :..:.:|:..|.....|:..:|.:|:.:|:.::|.|:.:||.:::.:..|.:.::.|..|:....
  Fly   407 MLEDWRKHERGSLPGPIELAIITYIMALIFEELKSLYSDGLFEYIMDLWNIVDYISNMFYVTWIL 471

Human   472 LK----VVAHNK-----FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQ 527
            .:    |:.|..     ...:..|:.|..|.|.|::||.||...|.|||:|..:::.:..|||||
  Fly   472 CRATAWVIVHRDLWFRGIDPYFPREHWHPFDPMLLSEGAFAAGMVFSYLKLVHIFSINPHLGPLQ 536

Human   528 ISMGQMLQDFGKFLGMFLLVLFSFTIGLTQL--YDKGYTSKEQKDC------VGIFCEQQSNDT- 583
            :|:|:|:.|..||..::.||||:|..||.||  |   |...|:..|      |..|.:|:...| 
  Fly   537 VSLGRMIIDIIKFFFIYTLVLFAFGCGLNQLLWY---YAELEKNKCYHLHPDVADFDDQEKACTI 598

Human   584 ---FHSFIGTCFALFWYIFSLAHVAIF----VTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLL 641
               |.:...|..:|||..|.|..:..|    :..|:      .|...::.|:|:|:.:|||..:|
  Fly   599 WRRFSNLFETSQSLFWASFGLVDLVSFDLAGIKSFT------RFWALLMFGSYSVINIIVLLNML 657

Human   642 VAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHT 706
            :||:..|:|:|:...|.||||||::||:|||:|..|:|||||:.|:.|.:             ..
  Fly   658 IAMMSNSYQIISERADTEWKFARSQLWMSYFEDGGTIPPPFNLCPNMKML-------------RK 709

Human   707 SKGKVKRQNSLKEWRNLKQKRDEN-YQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSK 770
            :.|: ||.:..|.:.....:|.:. :.|||..||.||:|: .|:.:.....|.:::.|:|||:|.
  Fly   710 TLGR-KRPSRTKSFMRKSMERAQTLHDKVMKLLVRRYITA-EQRRRDDYGITEDDIIEVRQDISS 772

Human   771 FRNEIRDL 778
            .|.|:.::
  Fly   773 LRFELLEI 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPC1NP_001238774.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
ANK 1 46..75 16/31 (52%)
trp 48..774 CDD:273311 282/774 (36%)
ANK 2 83..111 10/27 (37%)
ANK 3 112..138 14/30 (47%)
ANK 4 158..187 17/28 (61%)
trpNP_476768.1 trp 16..776 CDD:273311 285/782 (36%)
ANK 64..>168 CDD:238125 46/109 (42%)
ANK repeat 69..98 CDD:293786 10/28 (36%)
ANK repeat 99..135 CDD:293786 14/38 (37%)
ANK repeat 137..168 CDD:293786 17/33 (52%)
TRP_2 178..236 CDD:285535 26/57 (46%)
BASP1 938..1158 CDD:283191
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148014
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824310at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102173
Panther 1 1.100 - - O PTHR10117
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.750

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