DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRIO and trio

DIOPT Version :10

Sequence 1:NP_009049.2 Gene:TRIO / 7204 HGNCID:12303 Length:3097 Species:Homo sapiens
Sequence 2:NP_651960.2 Gene:trio / 43974 FlyBaseID:FBgn0024277 Length:2263 Species:Drosophila melanogaster


Alignment Length:27 Identity:6/27 - (22%)
Similarity:13/27 - (48%) Gaps:0/27 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    11 ISVMFEFLEYSLEHQLPNFSECWWDHW 37
            |..:.:.|.....:.:|...:|.||::
  Fly    64 IEQLIQVLSLRKRNIMPILKDCRWDYY 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRIONP_009049.2 SEC14 69..204 CDD:214706
SPEC 230..445 CDD:238103
Spectrin 1 311..418
SPEC 341..566 CDD:238103
Spectrin 2 538..644
SPEC 567..783 CDD:238103
SPEC 787..1014 CDD:238103
Spectrin 3 878..984
SPEC 908..1137 CDD:238103
Spectrin 4 1109..1216
SPEC 1143..1243 CDD:197544
RhoGEF 1295..1465 CDD:238091
PH1_Kalirin_Trio_like 1472..1594 CDD:270060
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1601..1650
SH3_Kalirin_1 1659..1718 CDD:212786
SH3-RhoG_link 1715..1972 CDD:465196
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1779..1906
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1927..1965
RhoGEF 1970..2143 CDD:238091
PH2_Kalirin_Trio_p63RhoGEF 2148..2286 CDD:270061
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2287..2552
PHA03247 <2330..2540 CDD:223021
SH3_Kalirin_2 2555..2613 CDD:212787
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2639..2660
I-set 2685..2776 CDD:400151
Ig strand B 2702..2706 CDD:409353
Ig strand C 2715..2719 CDD:409353
Ig strand E 2742..2746 CDD:409353
Ig strand F 2756..2761 CDD:409353
Ig strand G 2769..2772 CDD:409353
STKc_Trio_C 2788..3050 CDD:271015
trioNP_651960.2 SEC14 13..152 CDD:214706 6/27 (22%)
SPEC 314..>468 CDD:238103
SPEC 563..778 CDD:238103
SPEC 782..997 CDD:238103
SPEC 897..1119 CDD:238103
SPEC 1125..1226 CDD:197544
RhoGEF 1287..1455 CDD:459876
PH1_Kalirin_Trio_like 1462..1584 CDD:270060
SH3_Kalirin_1 1643..1707 CDD:212786
RhoGEF 1945..2121 CDD:459876
PH2_Kalirin_Trio_p63RhoGEF 2130..2260 CDD:270061
Blue background indicates that the domain is not in the aligned region.

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