DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddx54 and CG32344

DIOPT Version :9

Sequence 1:NP_082317.1 Gene:Ddx54 / 71990 MGIID:1919240 Length:874 Species:Mus musculus
Sequence 2:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster


Alignment Length:867 Identity:362/867 - (41%)
Similarity:513/867 - (59%) Gaps:122/867 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse    64 LPSFPTSECVSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPV 128
            :|.||:.:..:.......::::::: ||.||||||||||.:.:.|||.|:||||||||||||||:
  Fly     9 IPGFPSLDNDAGTSDRGADILKSKS-KKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPL 72

Mouse   129 ILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKFTG 193
            ||:|:||||||:||||||||||:|:||:|:.|....||||||||||||||:||.||.||||:|..
  Fly    73 ILEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGRFME 137

Mouse   194 LKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMGFAE 258
            ||:.|:||||.|:.||:|:|..||:|:|||||.:|:.|||:|||.|:||||||||||||||||.|
  Fly   138 LKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGE 202

Mouse   259 QLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFLLVREDTKA 323
            ||.|.:.|||...|||:|||||||||||||||||.:||||||||:|||.:.|...||..|.|.:.
  Fly   203 QLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRPDDRY 267

Mouse   324 AVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKC 388
            ..|:.||:.|:..|.|||||..|:||.|.::.:|...|:|.|.:||:||..|||||.|||.:.|.
  Fly   268 TALVVLLKYVIPVQSQTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKV 332

Mouse   389 STLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLH 453
            |.|||||:||||:|||.||.|:|..||.|.|||:|||||.|||||:|||||:|:.|:..:|||||
  Fly   333 SVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLH 397

Mouse   454 LFLGRSVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNAQQ 518
            |||.|..         ::.|:    ..||.:||.::::|..:: |.:..|..:.|:.|.:.||.:
  Fly   398 LFLNRPF---------NIHDS----SALGTIPQDLLEEEHLTV-TDIKKSHHIAGVLRTSENAYK 448

Mouse   519 QYVRSRPAPSPESIKRAKELDLAEL-------GLHPLFSSCFE---------------EGELQRL 561
            :|:.|||..|.::..|.|::....|       ...|:.:...|               |.:||..
  Fly   449 KYLSSRPVASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAKVSAAERKLQEE 513

Mouse   562 R--LVDSIKNYRTRTTIFEINASSKDPSSQMMRAKRQRDRKAVASFQQRR------QERQEGPA- 617
            :  ::..::::|...|:||:|.:.|.....:|:.||.:..:.:..|:|:|      :|::...| 
  Fly   514 KHDILVKMRSFRPGGTVFELNTTQKSTQFIVMKEKRMQHAEVINKFRQQRAEEDIDEEKKTIEAL 578

Mouse   618 DPAPQRELPQEEEEEMVETVEGVFTEVVGQKR---------PRPGPSQGAKRRRMETRQRDQEFY 673
            :|:..| :|..:|    |.:...|.:||..||         .:|      |:::.:...:|::.|
  Fly   579 NPSSGR-MPTADE----EAISSTFNKVVAPKRLQNMDALYKDKP------KKKKRKINSKDEDHY 632

Mouse   674 VPYRPKDFDSERGLSVSGAGGAFEQQVAGAVLDLMG-DEAQNMSRGQQQLKWDRKKKRFVGQSGQ 737
            |||:..|..:|.||:::.    ||:|...|...:.. |.:|.:.......||||.||:.|  |.|
  Fly   633 VPYQSADKHTEDGLAINN----FERQAQNAEFSVSDRDLSQEVKHKPGLKKWDRIKKKMV--SVQ 691

Mouse   738 EDK-KKIKTESGRFISSSYKRDLYQKWKQKQKIDDRDSEEEGPSNQRGPGPRRGGKRGRSQGTSQ 801
            :.: .||:||||.:|.:|:|...|.:||:|.||:|:...|...|:.....|....:|        
  Fly   692 DPRANKIRTESGAWIPASFKTGRYAEWKEKSKIEDQLQRENAGSDDENAKPLSHAQR-------- 748

Mouse   802 PRASSVPAGR-----MRSELKTK-----------EQILKQRRQAQKQRFLQRGGLKQLSARNRRR 850
                 .|..|     ::.|||.:           |||:|.|.:           |:.:..||...
  Fly   749 -----YPVSRHARHNLKLELKKRLTGNDKEMRRPEQIVKSRMR-----------LEFIKKRNEEN 797

Mouse   851 AQELRQGAFGRGAPSRKGKMRK 872
            |:        |.:.:||..|||
  Fly   798 AE--------RKSENRKRSMRK 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx54NP_082317.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..76 3/11 (27%)
SrmB 69..537 CDD:223587 262/467 (56%)
Q motif 95..123 20/27 (74%)
DEADc 97..299 CDD:238167 145/201 (72%)
DEAD box 246..249 2/2 (100%)
HELICc 314..440 CDD:238034 72/125 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 581..687 28/121 (23%)
DBP10CT 706..766 CDD:285373 23/61 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 712..874 50/178 (28%)
CG32344NP_612028.4 DEADc 41..243 CDD:238167 145/201 (72%)
DEXDc 54..243 CDD:214692 137/188 (73%)
HELICc 263..384 CDD:238034 69/120 (58%)
DBP10CT 666..721 CDD:285373 23/56 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834116
Domainoid 1 1.000 243 1.000 Domainoid score I2212
eggNOG 1 0.900 - - E2759_KOG0337
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5590
Inparanoid 1 1.050 595 1.000 Inparanoid score I960
Isobase 1 0.950 - 0 Normalized mean entropy S1304
OMA 1 1.010 - - QHG52023
OrthoDB 1 1.010 - - D268859at2759
OrthoFinder 1 1.000 - - FOG0004971
OrthoInspector 1 1.000 - - oto94376
orthoMCL 1 0.900 - - OOG6_101760
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R289
SonicParanoid 1 1.000 - - X3504
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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