Sequence 1: | NP_082180.2 | Gene: | Cpn2 / 71756 | MGIID: | 1919006 | Length: | 547 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
Alignment Length: | 536 | Identity: | 141/536 - (26%) |
---|---|---|---|
Similarity: | 195/536 - (36%) | Gaps: | 153/536 - (28%) |
- Green bases have known domain annotations that are detailed below.
Mouse 6 WLCW---VSLLLLARL-------TQPCPVGCDCFGRE----VFCSDEQLADIPPDIPPHITDIVF 56
Mouse 57 VETAFTTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLS 121
Mouse 122 SLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPK 186
Mouse 187 GAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHN 251
Mouse 252 AICHLPVS------------------------LFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLL 292
Mouse 293 HLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDS-NNLTALHPAL 356
Mouse 357 FHNLSRLQLLNLSRN-QLTTLPGGIFDTNYDLFNLAL----------------------LG-NPW 397
Mouse 398 QCDCHLSYLTSWLRLYNNQISNTHTFCAGPAYLKGQLVPNLKQEQLICPVNPGHLSFRALGLDEG 462
Mouse 463 EPAGSWDLTVEGRAAH 478 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cpn2 | NP_082180.2 | LRRNT | 21..52 | CDD:214470 | 12/34 (35%) |
LRR_8 | 73..133 | CDD:290566 | 5/59 (8%) | ||
leucine-rich repeat | 75..98 | CDD:275380 | 1/22 (5%) | ||
LRR 1 | 98..119 | 3/20 (15%) | |||
leucine-rich repeat | 99..122 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 121..181 | CDD:290566 | 13/59 (22%) | ||
LRR 2 | 122..143 | 0/20 (0%) | |||
leucine-rich repeat | 123..146 | CDD:275380 | 0/22 (0%) | ||
LRR 3 | 146..167 | 6/20 (30%) | |||
leucine-rich repeat | 147..170 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | 149..374 | CDD:238064 | 81/250 (32%) | ||
LRR 4 | 170..191 | 12/20 (60%) | |||
LRR_8 | 171..229 | CDD:290566 | 28/57 (49%) | ||
leucine-rich repeat | 171..194 | CDD:275380 | 13/22 (59%) | ||
LRR 5 | 194..215 | 7/20 (35%) | |||
leucine-rich repeat | 195..218 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 217..277 | CDD:290566 | 21/83 (25%) | ||
LRR 6 | 218..239 | 9/20 (45%) | |||
leucine-rich repeat | 219..242 | CDD:275380 | 8/22 (36%) | ||
LRR 7 | 242..263 | 7/44 (16%) | |||
leucine-rich repeat | 243..266 | CDD:275380 | 8/46 (17%) | ||
LRR_8 | 266..325 | CDD:290566 | 20/58 (34%) | ||
LRR 8 | 266..287 | 6/20 (30%) | |||
leucine-rich repeat | 267..290 | CDD:275380 | 6/22 (27%) | ||
LRR 9 | 290..311 | 8/20 (40%) | |||
leucine-rich repeat | 291..314 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 313..373 | CDD:290566 | 20/61 (33%) | ||
LRR 10 | 314..335 | 7/20 (35%) | |||
leucine-rich repeat | 315..338 | CDD:275380 | 9/22 (41%) | ||
LRR 11 | 338..359 | 5/21 (24%) | |||
leucine-rich repeat | 339..360 | CDD:275380 | 5/21 (24%) | ||
LRR 12 | 362..383 | 9/21 (43%) | |||
leucine-rich repeat | 363..382 | CDD:275380 | 8/19 (42%) | ||
LRRCT | 395..436 | CDD:214507 | 12/40 (30%) | ||
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 6/46 (13%) |
leucine-rich repeat | 98..121 | CDD:275380 | 9/67 (13%) | ||
LRR_8 | 120..180 | CDD:404697 | 28/59 (47%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 13/22 (59%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 8/22 (36%) | ||
LRR | <161..>354 | CDD:227223 | 57/192 (30%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 8/46 (17%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 5/23 (22%) | ||
LRR_8 | 337..397 | CDD:404697 | 13/59 (22%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 9/20 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |