DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpn2 and Fili

DIOPT Version :9

Sequence 1:NP_082180.2 Gene:Cpn2 / 71756 MGIID:1919006 Length:547 Species:Mus musculus
Sequence 2:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster


Alignment Length:536 Identity:141/536 - (26%)
Similarity:195/536 - (36%) Gaps:153/536 - (28%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 WLCW---VSLLLLARL-------TQPCPVGCDCFGRE----VFCSDEQLADIPPDIPPHITDIVF 56
            |||.   |.||||..|       |..||..|.|.|.|    ..|.|..|.|:|..:.|   :..:
  Fly    16 WLCGAIPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNP---ETKY 77

Mouse    57 VETAFTTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLS 121
            :......:||..||                         ||....|||                 
  Fly    78 INLTVNRIRTLEFS-------------------------LPFYMKLEI----------------- 100

Mouse   122 SLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPK 186
                                        |.|..|.:.||..:.|:...:||||||::||::.|.|
  Fly   101 ----------------------------LDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHK 137

Mouse   187 GAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHN 251
            .||:.||.|.:|.||.|.:..:...||..|:||.||.|..|.|..|..:.|..:.:||:|..::|
  Fly   138 HAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNN 202

Mouse   252 AICHLPVS------------------------LFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLL 292
            .:..:|.|                        .|..|..|..||::.|.:..|....|.....|.
  Fly   203 RLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLK 267

Mouse   293 HLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDS-NNLTALHPAL 356
            ||.||.|.|..:|....:.||.|..|.|..|..:.||...|.||..|.:|.|.. :.|..:....
  Fly   268 HLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRA 332

Mouse   357 FHNLSRLQLLNLSRN-QLTTLPGGIFDTNYDLFNLAL----------------------LG-NPW 397
            |.:.:.||.|:|:.| ||:.:|..:|..|.::..:.:                      || ||.
  Fly   333 FVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNPL 397

Mouse   398 QCDCHLSYLTSWLRLYNNQISNTHTFCAGPAYLKGQLVPNLKQEQLICPVNPGHLSFRALGLDEG 462
            ||:|.|.:|  | ||.........   .|..:..|..|..|.:|     .:...|:      ||.
  Fly   398 QCNCSLLWL--W-RLVTGNFEGVD---PGMEHAAGGAVAALAKE-----ADDEELA------DEA 445

Mouse   463 EPAGSWDLTVEGRAAH 478
            ....|.|..|...||:
  Fly   446 TAVASTDDGVAALAAY 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpn2NP_082180.2 LRRNT 21..52 CDD:214470 12/34 (35%)
LRR_8 73..133 CDD:290566 5/59 (8%)
leucine-rich repeat 75..98 CDD:275380 1/22 (5%)
LRR 1 98..119 3/20 (15%)
leucine-rich repeat 99..122 CDD:275380 3/22 (14%)
LRR_8 121..181 CDD:290566 13/59 (22%)
LRR 2 122..143 0/20 (0%)
leucine-rich repeat 123..146 CDD:275380 0/22 (0%)
LRR 3 146..167 6/20 (30%)
leucine-rich repeat 147..170 CDD:275380 6/22 (27%)
LRR_RI 149..374 CDD:238064 81/250 (32%)
LRR 4 170..191 12/20 (60%)
LRR_8 171..229 CDD:290566 28/57 (49%)
leucine-rich repeat 171..194 CDD:275380 13/22 (59%)
LRR 5 194..215 7/20 (35%)
leucine-rich repeat 195..218 CDD:275380 8/22 (36%)
LRR_8 217..277 CDD:290566 21/83 (25%)
LRR 6 218..239 9/20 (45%)
leucine-rich repeat 219..242 CDD:275380 8/22 (36%)
LRR 7 242..263 7/44 (16%)
leucine-rich repeat 243..266 CDD:275380 8/46 (17%)
LRR_8 266..325 CDD:290566 20/58 (34%)
LRR 8 266..287 6/20 (30%)
leucine-rich repeat 267..290 CDD:275380 6/22 (27%)
LRR 9 290..311 8/20 (40%)
leucine-rich repeat 291..314 CDD:275380 9/22 (41%)
LRR_8 313..373 CDD:290566 20/61 (33%)
LRR 10 314..335 7/20 (35%)
leucine-rich repeat 315..338 CDD:275380 9/22 (41%)
LRR 11 338..359 5/21 (24%)
leucine-rich repeat 339..360 CDD:275380 5/21 (24%)
LRR 12 362..383 9/21 (43%)
leucine-rich repeat 363..382 CDD:275380 8/19 (42%)
LRRCT 395..436 CDD:214507 12/40 (30%)
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378 6/46 (13%)
leucine-rich repeat 98..121 CDD:275380 9/67 (13%)
LRR_8 120..180 CDD:404697 28/59 (47%)
leucine-rich repeat 122..145 CDD:275380 13/22 (59%)
leucine-rich repeat 146..169 CDD:275380 8/22 (36%)
LRR <161..>354 CDD:227223 57/192 (30%)
leucine-rich repeat 170..193 CDD:275380 8/22 (36%)
leucine-rich repeat 194..217 CDD:275380 6/22 (27%)
leucine-rich repeat 218..265 CDD:275380 8/46 (17%)
leucine-rich repeat 266..289 CDD:275380 9/22 (41%)
leucine-rich repeat 290..313 CDD:275380 9/22 (41%)
leucine-rich repeat 314..338 CDD:275380 5/23 (22%)
LRR_8 337..397 CDD:404697 13/59 (22%)
leucine-rich repeat 339..360 CDD:275380 9/20 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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