DRSC/TRiP Functional Genomics Resources

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Protein Alignment TPM4 and TPM1

DIOPT Version :10

Sequence 1:NP_001138632.1 Gene:TPM4 / 7171 HGNCID:12013 Length:284 Species:Homo sapiens
Sequence 2:NP_014320.1 Gene:TPM1 / 855645 SGDID:S000005023 Length:199 Species:Saccharomyces cerevisiae


Alignment Length:207 Identity:53/207 - (25%)
Similarity:109/207 - (52%) Gaps:8/207 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEAIKKKMQMLKLDKENAIDRAEQAEADKKAAEDKCKQVEEELTHLQKKLKGTEDELDKYSEDLK 65
            |:.|::|:..|||:.|:..::.|:.:...|..|.:..:.|.::..|..|.:..|||::|....|.
Yeast     1 MDKIREKLSNLKLEAESWQEKYEELKEKNKDLEQENVEKENQIKSLTVKNQQLEDEIEKLEAGLS 65

Human    66 DAQEKLELTEKKASDAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130
            |:::    ||:...:.|..:.:|..:...:|||:::.:..||.:.|..|::......::...|  
Yeast    66 DSKQ----TEQDNVEKENQIKSLTVKNHQLEEEIEKLEAELAESKQLSEDSHHLQSNNDNFSK-- 124

Human   131 ENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCGDLEE 195
            :|:.:  ||.:|..:.:|||......|:|.|.:::.|::..||.:.|..|.:.|...:|..|.::
Yeast   125 KNQQL--EEDLEESDTKLKETTEKLRESDLKADQLERRVAALEEQREEWERKNEELTVKYEDAKK 187

Human   196 ELKNVTNNLKSL 207
            ||..:..:|::|
Yeast   188 ELDEIAASLENL 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TPM4NP_001138632.1 Tropomyosin 48..282 CDD:459736 41/160 (26%)
TPM1NP_014320.1 Tropomyosin_1 7..186 CDD:403808 47/186 (25%)

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