DRSC/TRiP Functional Genomics Resources

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Protein Alignment TPM4 and tpm4

DIOPT Version :10

Sequence 1:NP_001138632.1 Gene:TPM4 / 7171 HGNCID:12013 Length:284 Species:Homo sapiens
Sequence 2:XP_012818712.1 Gene:tpm4 / 549841 XenbaseID:XB-GENE-6077097 Length:284 Species:Xenopus tropicalis


Alignment Length:284 Identity:260/284 - (91%)
Similarity:272/284 - (95%) Gaps:0/284 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEAIKKKMQMLKLDKENAIDRAEQAEADKKAAEDKCKQVEEELTHLQKKLKGTEDELDKYSEDLK 65
            ||||||||||||||||||||||||||||||||||||||||:||..|||||||||||||||||.||
 Frog     1 MEAIKKKMQMLKLDKENAIDRAEQAEADKKAAEDKCKQVEDELVALQKKLKGTEDELDKYSEALK 65

Human    66 DAQEKLELTEKKASDAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130
            |||||||..:|||:||||:||||||||||||||||||||||||||||||||||||||||||||||
 Frog    66 DAQEKLEQADKKATDAEGEVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130

Human   131 ENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCGDLEE 195
            |||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||.||||
 Frog   131 ENRAMKDEEKMEIQELQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCSDLEE 195

Human   196 ELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKL 260
            ||||||||||||||.||||||||||||||||:|:|||||||||||||||:||||||||||||:||
 Frog   196 ELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKL 260

Human   261 AQAKEENVGLHQTLDQTLNELNCI 284
            |.|||||:|:||.|||||.||..:
 Frog   261 ATAKEENLGMHQVLDQTLQELGSL 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TPM4NP_001138632.1 Tropomyosin 48..282 CDD:459736 215/233 (92%)
tpm4XP_012818712.1 Tropomyosin 48..281 CDD:459736 214/232 (92%)

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