DRSC/TRiP Functional Genomics Resources

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Protein Alignment TPM4 and tpm4b

DIOPT Version :10

Sequence 1:NP_001138632.1 Gene:TPM4 / 7171 HGNCID:12013 Length:284 Species:Homo sapiens
Sequence 2:XP_073768425.1 Gene:tpm4b / 324244 ZFINID:ZDB-GENE-030131-2964 Length:284 Species:Danio rerio


Alignment Length:284 Identity:252/284 - (88%)
Similarity:271/284 - (95%) Gaps:0/284 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEAIKKKMQMLKLDKENAIDRAEQAEADKKAAEDKCKQVEEELTHLQKKLKGTEDELDKYSEDLK 65
            ||||||||||||||||||||||||||:|||||||||||:|:||..||||||.||||||||||.||
Zfish     1 MEAIKKKMQMLKLDKENAIDRAEQAESDKKAAEDKCKQLEDELLGLQKKLKATEDELDKYSEALK 65

Human    66 DAQEKLELTEKKASDAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130
            ||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||:|||
Zfish    66 DAQEKLELSEKKASDAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGIKVI 130

Human   131 ENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCGDLEE 195
            |||||||||||||||:||||||||||::||||||||||||||||||||||||||::|||.|||||
Zfish   131 ENRAMKDEEKMEIQEIQLKEAKHIAEDSDRKYEEVARKLVILEGELERAEERAEIAELKGGDLEE 195

Human   196 ELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKL 260
            ||||||||||||||.||||||||||||:|||:|:|||||.|||||||||||||||||||||||.|
Zfish   196 ELKNVTNNLKSLEAQSEKYSEKEDKYEDEIKVLTDKLKEVETRAEFAERTVAKLEKTIDDLEESL 260

Human   261 AQAKEENVGLHQTLDQTLNELNCI 284
            .:||::|:.:||.|||||.|||.:
Zfish   261 GEAKQQNLEMHQVLDQTLQELNSL 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TPM4NP_001138632.1 Tropomyosin 48..282 CDD:459736 208/233 (89%)
tpm4bXP_073768425.1 None

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