DRSC/TRiP Functional Genomics Resources

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Protein Alignment TPM3 and Tm1

DIOPT Version :10

Sequence 1:NP_689476.2 Gene:TPM3 / 7170 HGNCID:12012 Length:285 Species:Homo sapiens
Sequence 2:NP_732006.2 Gene:Tm1 / 41852 FlyBaseID:FBgn0003721 Length:711 Species:Drosophila melanogaster


Alignment Length:336 Identity:148/336 - (44%)
Similarity:209/336 - (62%) Gaps:60/336 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     7 KKMQMLKLDKENALDRAEQAEAEQKQA--EERSK------QLEDELA------AMQKKLKGTEDE 57
            ||.:..|.::....|::|:::.::|.:  :||||      |..|.||      |:.:.:...:|:
  Fly   372 KKKKREKGERSEKSDKSEKSDRKKKSSGKKERSKRSNPMEQSSDSLATDLSAGAIDEGIALADDD 436

Human    58 LDKYSE--ALKDAQEKLEL-AEKKA-------AD------------------------------- 81
            .::.:|  .|:...|..|: ||::|       ||                               
  Fly   437 DNQAAEWSKLRCTSEAAEIVAEREARRNKGRCADYPGLAFGRSIFSSDTMMKFNIIRNELHNIMN 501

Human    82 -----AEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEK 141
                 ||:|||:|||||||:||:|:|::|||.:|..||.||.:|||||||..|::|||||.|||:
  Fly   502 TQLKRAESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQAADESERARKILENRALADEER 566

Human   142 MELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLK 206
            |:..|.|||||:.:|||||:||:||||||.::|.||||.|||||..|:|..||||||:.|.||||
  Fly   567 MDALENQLKEARFLAEEADKKYDEVARKLAMVEADLERAEERAEQGENKIVELEEELRVVGNNLK 631

Human   207 SLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAI 271
            |||...||.:|:|::|:.:||.|..:|||||.|||||||||.||:|.:|.|||:|..:|.:||.|
  Fly   632 SLEVSEEKANQREEEYKNQIKTLNTRLKEAEARAEFAERSVQKLQKEVDRLEDDLVLEKERYKDI 696

Human   272 SEELDHALNDM 282
            .::||.|..::
  Fly   697 GDDLDTAFVEL 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TPM3NP_689476.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..44 9/35 (26%)
Tropomyosin 49..283 CDD:459736 133/280 (48%)
Tm1NP_732006.2 Tropomyosin_1 7..>85 CDD:403808
Tropomyosin 507..708 CDD:459736 123/201 (61%)
Blue background indicates that the domain is not in the aligned region.

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