DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Colec11 and lectin-22C

DIOPT Version :9

Sequence 1:	NP_001300907.1	Gene:	Colec11 / 71693	MGIID:	1918943	Length:	278	Species:	Mus musculus
Sequence 2:	NP_001137766.1	Gene:	lectin-22C / 7354375	FlyBaseID:	FBgn0259230	Length:	263	Species:	Drosophila melanogaster

Alignment Length:	157	Identity:	47/157 - (29%)
Similarity:	79/157 - (50%)	Gaps:	16/157 - (10%)

- Green bases have known domain annotations that are detailed below.

Mouse   123 IGEMDNQVTQLTTELKFIKNALPSPAAVAGVRETESKIYLLVK-EEKRYADAQLSCQARGGTLSM 186
            :..::..|.::.|::|::           |..:..||.|.:.| .||.::.|..:|:..||.|:.
  Fly   120 LSALEKTVLEVKTKIKYL-----------GFEQIGSKYYYIEKVSEKNWSTASKTCRNMGGHLAD 173

Mouse   187 PKDEAANGLMASYLAQAGLARVFIGINDLEKEGAFVYSDRSPMQTFNKWRSGEPNNAYDEEDCVE 251
            .||||....:.:.|.:.  ...::|||||:.||.|:........||.||.||.|:. .|..:||
  Fly   174 IKDEADLAAIKANLKED--THYWLGINDLDHEGKFLSMPTGKQTTFLKWASGRPSQ-LDTLNCV- 234

Mouse   252 MVASGGWNDVACHITMYFMCEFDKENL 278
            .:.:|...|..||.|..|:|:.::|:|
  Fly   235 FLYNGEMYDYPCHYTFRFICQTEEEDL 261

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Colec11	NP_001300907.1	Collagen	41..96	CDD:189968
Colec11	NP_001300907.1	CLECT_collectin_like	158..273	CDD:153061	41/115 (36%)
lectin-22C	NP_001137766.1	CLECT	146..255	CDD:153057	38/112 (34%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	61	1.000	Domainoid score	I10387
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	74	1.000	Inparanoid score	I5263
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm43824
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4956
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.990