DRSC/TRiP Functional Genomics Resources

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Protein Alignment TPM2 and tpm2

DIOPT Version :9

Sequence 1:XP_016870576.1 Gene:TPM2 / 7169 HGNCID:12011 Length:303 Species:Homo sapiens
Sequence 2:NP_001002119.1 Gene:tpm2 / 415209 ZFINID:ZDB-GENE-040625-114 Length:284 Species:Danio rerio


Alignment Length:216 Identity:182/216 - (84%)
Similarity:198/216 - (91%) Gaps:0/216 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKYSESVK 65
            |:||||||||||||||||||||||||.|||.|||:|||||||..||||||||.|||::|||||:|
Zfish     1 MEAIKKKMQMLKLDKENAIDRAEQAEIDKKGAEDKCKQLEEELLALQKKLKGVEDELDKYSESLK 65

Human    66 EAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130
            :||||||||||||.||||:||||||||||||||||||||||||||||||||||||||||||||||
Zfish    66 DAQEKLEQAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVI 130

Human   131 ENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESRARQLEE 195
            ||||.|||||||:|||||||||||||::|||||||||||||||||||||||||||||:::..|||
Zfish   131 ENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEAKSGDLEE 195

Human   196 ELRTMDQALKSLMASEEEVVT 216
            ||:.:...||||.|..|:..|
Zfish   196 ELKNVTNNLKSLEAQAEKYST 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TPM2XP_016870576.1 None
tpm2NP_001002119.1 Tropomyosin 48..282 CDD:395200 141/169 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I29801
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48449
OrthoDB 1 1.010 - - D1576041at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101961
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10653
SonicParanoid 1 1.000 - - X463
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
88.360

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