DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galnt14 and Pgant9

DIOPT Version :9

Sequence 1:NP_082140.2 Gene:Galnt14 / 71685 MGIID:1918935 Length:550 Species:Mus musculus
Sequence 2:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster


Alignment Length:545 Identity:219/545 - (40%)
Similarity:311/545 - (57%) Gaps:58/545 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse    27 TKRKLEVP---------LGPEVQTPKPSDADWDDLWEQFDERRYLNAKKWRVGDDPYKLYAFNQR 82
            :|:.::.|         ||..|:.||          |..||.:       :..||.:...||||.
  Fly   132 SKKVIDPPANFEENPGELGKPVRLPK----------EMSDEMK-------KAVDDGWTKNAFNQY 179

Mouse    83 ESERISSNRAVPDTRHKRC-SLLVYCTDLPPTSIIITFHNEARSTLLRTIRSVLNRTPMHLIQEI 146
            .|:.||.:|.:||.|...| ....|.|:||.|.:||.|||||.:.||||:.|||:|:|.|||.:|
  Fly   180 VSDLISVHRTLPDPRDAWCKDEARYLTNLPKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKI 244

Mouse   147 ILVDDFSNDPEDCKQL----IKLPKVKCLRNNERQGLVRSRMRGADIAQGTTLTFLDSHCEVNRD 207
            |||||:|:.|...:||    ...|||:.:|..:|:||:|:|:.||:.|:...||:||||||....
  Fly   245 ILVDDYSDMPHLKRQLEDYFAAYPKVQIIRGQKREGLIRARILGANHAKSPVLTYLDSHCECTEG 309

Mouse   208 WLQPLLHRVKEDYTRVVCPVIDIINLDT--FNYIESASELRGGFDWSLHFQWEQLSLEQKALRLD 270
            ||:|||.|:..:.|.|||||||:|:.:|  ::|.:|.....|||||:|.|.|..:...::.....
  Fly   310 WLEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGGFDWNLQFSWHPVPERERKRHNS 374

Mouse   271 PTEPIRTPIIAGGLFVIDKAWFDYLGKYDVDMDIWGGENFEISFRVWMCGGGLEIIPCSRVGHVF 335
            ..||:.:|.:|||||.||:.:||.||.||...|||||||.|:||:.|||||.|||:|||.|||:|
  Fly   375 TAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIF 439

Mouse   336 RKKHPYVFPDGNANTYIKNTKRTAEVWMDEYKQYYYAARPFALERPFGNIENRLNLRKNLHCQTF 400
            ||:.||.:..| .|...||:.|.||||||||.|||| .|....:..:|::.:|..||.:|.|::|
  Fly   440 RKRSPYKWRSG-VNVLKKNSVRLAEVWMDEYSQYYY-HRIGNDKGDWGDVSDRRKLRNDLKCKSF 502

Mouse   401 KWYLENVYPELRVPPDSSIQKGNIRQ----RQKCLESQKQKK--QEILRLSPCAKVKGDGAKSQV 459
            ||||:|:||||.:|.| |:..|.||.    .:.||::...||  ::.:...||.:..|    :|.
  Fly   503 KWYLDNIYPELFIPGD-SVAHGEIRNLGYGGRTCLDAPAGKKHQKKAVGTYPCHRQGG----NQY 562

Mouse   460 WAFTYTQQIIQEELCLSVVTLFPGAPVVLALCKNGDERQLWT--KTGARIEHIASHLCLDTDMFG 522
            |..:...:|.:::.||.    :.|..|.|..|..|...|.||  :...::.|..|..||..    
  Fly   563 WMLSKAGEIRRDDSCLD----YAGKDVTLFGCHGGKGNQFWTYRENTKQLHHGTSGKCLAI---- 619

Mouse   523 DSTEDGKEVVVNPCESSLMSQHWDI 547
              :|...::::..|.:||..|.|.:
  Fly   620 --SESKDKLLMEECSASLSRQQWTL 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Galnt14NP_082140.2 Catalytic subdomain A 110..215 57/108 (53%)
Glyco_tranf_2_3 111..337 CDD:290369 118/231 (51%)
pp-GalNAc-T 114..408 CDD:133004 150/299 (50%)
Catalytic subdomain B 274..336 39/61 (64%)
RICIN 422..547 CDD:238092 33/132 (25%)
Ricin_B_lectin 422..545 CDD:279046 32/130 (25%)
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 141/272 (52%)
pp-GalNAc-T 213..510 CDD:133004 150/298 (50%)
Ricin_B_lectin 521..640 CDD:279046 32/132 (24%)
RICIN 523..642 CDD:238092 33/132 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842528
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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