DRSC/TRiP Functional Genomics Resources

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Protein Alignment TP53 and tp53

DIOPT Version :10

Sequence 1:NP_000537.3 Gene:TP53 / 7157 HGNCID:11998 Length:393 Species:Homo sapiens
Sequence 2:NP_001001903.1 Gene:tp53 / 431679 XenbaseID:XB-GENE-484286 Length:362 Species:Xenopus tropicalis


Alignment Length:404 Identity:204/404 - (50%)
Similarity:247/404 - (61%) Gaps:56/404 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     3 EPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQW--FTEDP-GPD--- 61
            ||.|:..:|||||||||.|||.|||             |.|......:|.:  |:|.| .||   
 Frog     2 EPSSETGMEPPLSQETFEDLWSLLP-------------DPLQTGTGQMENFAEFSEYPLAPDMTV 53

Human    62 -EAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCT 125
             :...|....|.|.                   ||:|||.:.|.||||.:|.|..:|||||||||
 Frog    54 LQEGLMGNTVPTVT-------------------SSAVPSTEDYAGSYGLKLEFQQNGTAKSVTCT 99

Human   126 YSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSD-SDGLA 189
            ||..|||:|||||||||:.:.|:..||.|:.:||.|:||:|:|:.|||:|||||||..: .|..|
 Frog   100 YSTDLNKLFCQLAKTCPLLVRVERPPPLGSILRATAVYKKSEHVAEVVKRCPHHERSVEPGDDPA 164

Human   190 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTI 254
            ||.||:|||||.:..|::|..|.||||.||||.|:||::|||:.|||||||||||||||||||||
 Frog   165 PPSHLMRVEGNSKAYYMEDVGTGRHSVCVPYEGPQVGTECTTVLYNYMCNSSCMGGMNRRPILTI 229

Human   255 ITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPK 319
            ||||...|.||||..|||||||||||||||||:|..||    ..|.|.. ||.|.:..||.|...
 Frog   230 ITLESPEGLLLGRRCFEVRVCACPGRDRRTEEDNCTKK----RGLKPNG-KRELSHPPSSDPPLP 289

Human   320 KKPL----DGEYFTLQIRGRERFEMFRELNEALELKDA-QAGKEPGGSRAHSSHLKSKKGQSTSR 379
            ||.|    |.|.|||.|:||.|:||.::||:||||::: ...|.....|.....:|.|||     
 Frog   290 KKRLVEEDDEETFTLLIKGRSRYEMIKKLNDALELQESLDQQKLSIKCRKCRDEIKPKKG----- 349

Human   380 HKKLMFKTEGPDSD 393
             |||:.|.|..||:
 Frog   350 -KKLLVKDELQDSE 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TP53NP_000537.3 Interaction with CCAR2. /evidence=ECO:0000269|PubMed:25732823 1..320 171/324 (53%)
Interaction with HRMT1L2. /evidence=ECO:0000269|PubMed:15186775 1..83 29/86 (34%)
Transcription activation (acidic) 1..44 19/40 (48%)
P53_TAD 6..30 CDD:462520 16/23 (70%)
TADI 17..25 6/7 (86%)
TAD2 35..59 CDD:375947 6/26 (23%)
TADII 48..56 2/9 (22%)
Disordered. /evidence=ECO:0000269|PubMed:31953488 50..96 10/52 (19%)
Interaction with WWOX 66..110 13/43 (30%)
Interaction with HIPK1. /evidence=ECO:0000250 100..370 159/275 (58%)
Required for interaction with ZNF385A. /evidence=ECO:0000269|PubMed:17719541 100..300 129/200 (65%)
P53 109..288 CDD:176262 121/179 (68%)
Required for interaction with FBXO42. /evidence=ECO:0000269|PubMed:19509332 113..236 74/123 (60%)
Interaction with AXIN1. /evidence=ECO:0000250 116..292 120/176 (68%)
Interaction with the 53BP2 SH3 domain 241..248 6/6 (100%)
Interaction with E4F1. /evidence=ECO:0000269|PubMed:10644996 256..294 28/37 (76%)
Interaction with DNA 273..280 6/6 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..325 19/46 (41%)
Interaction with CARM1. /evidence=ECO:0000269|PubMed:15186775 300..393 39/97 (40%)
Bipartite nuclear localization signal 305..321 6/15 (40%)
Interaction with HIPK2 319..360 21/45 (47%)
P53_tetramer 319..358 CDD:462238 20/43 (47%)
Oligomerization 325..356 16/31 (52%)
Nuclear export signal 339..350 6/10 (60%)
Disordered. /evidence=ECO:0000269|PubMed:31953488, ECO:0000269|PubMed:36108750 351..393 12/42 (29%)
Interaction with USP7 359..363 0/3 (0%)
Basic (repression of DNA-binding) 368..387 7/18 (39%)
[KR]-[STA]-K motif 370..372 1/1 (100%)
Interaction with MORN3. /evidence=ECO:0000269|PubMed:29681526 374..393 7/18 (39%)
tp53NP_001001903.1 P53_TAD 5..28 CDD:462520 16/35 (46%)
P53 84..264 CDD:176262 121/179 (68%)
P53_tetramer 290..332 CDD:462238 20/41 (49%)

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