DRSC/TRiP Functional Genomics Resources

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Protein Alignment TP53 and tp53

DIOPT Version :10

Sequence 1:NP_000537.3 Gene:TP53 / 7157 HGNCID:11998 Length:393 Species:Homo sapiens
Sequence 2:NP_001258749.1 Gene:tp53 / 30590 ZFINID:ZDB-GENE-990415-270 Length:374 Species:Danio rerio


Alignment Length:397 Identity:199/397 - (50%)
Similarity:243/397 - (61%) Gaps:46/397 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    15 SQETFSDLWKLLPENNVLSPLPS------QAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPV 73
            ||| |::||    |.|::|..|.      ..::|....|...:..|.|:. .:|.|: |...|| 
Zfish     6 SQE-FAELW----EKNLISIQPPGGGSCWDIINDEEYLPGSFDPNFFENV-LEEQPQ-PSTLPP- 62

Human    74 APAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLA 138
                                :|:||....|.|.:||||.|..|||||||||||||.|||:|||||
Zfish    63 --------------------TSTVPETSDYPGDHGFRLRFPQSGTAKSVTCTYSPDLNKLFCQLA 107

Human   139 KTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRV 203
            ||||||:.||..||.|:.|||.||||:|:|:.|||||||||||..|.|.|||..||||||||.|.
Zfish   108 KTCPVQMVVDVAPPQGSVVRATAIYKKSEHVAEVVRRCPHHERTPDGDNLAPAGHLIRVEGNQRA 172

Human   204 EYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRN 268
            .|.:|..|.||||.||||.|::|::.||:..||||||||||||||||||||||||...|.||||.
Zfish   173 NYREDNITLRHSVFVPYEAPQLGAEWTTVLLNYMCNSSCMGGMNRRPILTIITLETQEGQLLGRR 237

Human   269 SFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGS-TKRALPNNTSSS---PQPKKK----PLDG 325
            ||||||||||||||:|||.|.:|..|........: |||:|...:||:   |:..||    ..|.
Zfish   238 SFEVRVCACPGRDRKTEESNFKKDQETKTMAKTTTGTKRSLVKESSSATLRPEGSKKAKGSSSDE 302

Human   326 EYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTS---RHKKLMFKT 387
            |.||||:|||||:|:.::||::|||.|.....:....|........|:.:.:|   :.||||.|.
Zfish   303 EIFTLQVRGRERYEILKKLNDSLELSDVVPASDAEKYRQKFMTKNKKENRESSEPKQGKKLMVKD 367

Human   388 EG-PDSD 393
            || .|||
Zfish   368 EGRSDSD 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TP53NP_000537.3 Interaction with CCAR2. /evidence=ECO:0000269|PubMed:25732823 1..320 166/314 (53%)
Interaction with HRMT1L2. /evidence=ECO:0000269|PubMed:15186775 1..83 19/73 (26%)
Transcription activation (acidic) 1..44 11/34 (32%)
P53_TAD 6..30 CDD:462520 7/14 (50%)
TADI 17..25 4/7 (57%)
TAD2 35..59 CDD:375947 5/29 (17%)
TADII 48..56 1/7 (14%)
Disordered. /evidence=ECO:0000269|PubMed:31953488 50..96 7/45 (16%)
Interaction with WWOX 66..110 9/43 (21%)
Interaction with HIPK1. /evidence=ECO:0000250 100..370 165/277 (60%)
Required for interaction with ZNF385A. /evidence=ECO:0000269|PubMed:17719541 100..300 137/199 (69%)
P53 109..288 CDD:176262 131/178 (74%)
Required for interaction with FBXO42. /evidence=ECO:0000269|PubMed:19509332 113..236 82/122 (67%)
Interaction with AXIN1. /evidence=ECO:0000250 116..292 128/175 (73%)
Interaction with the 53BP2 SH3 domain 241..248 6/6 (100%)
Interaction with E4F1. /evidence=ECO:0000269|PubMed:10644996 256..294 27/37 (73%)
Interaction with DNA 273..280 6/6 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..325 16/50 (32%)
Interaction with CARM1. /evidence=ECO:0000269|PubMed:15186775 300..393 38/104 (37%)
Bipartite nuclear localization signal 305..321 6/18 (33%)
Interaction with HIPK2 319..360 20/44 (45%)
P53_tetramer 319..358 CDD:462238 20/42 (48%)
Oligomerization 325..356 17/30 (57%)
Nuclear export signal 339..350 4/10 (40%)
Disordered. /evidence=ECO:0000269|PubMed:31953488, ECO:0000269|PubMed:36108750 351..393 12/45 (27%)
Interaction with USP7 359..363 0/3 (0%)
Basic (repression of DNA-binding) 368..387 6/21 (29%)
[KR]-[STA]-K motif 370..372 0/1 (0%)
Interaction with MORN3. /evidence=ECO:0000269|PubMed:29681526 374..393 9/22 (41%)
tp53NP_001258749.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..81 13/49 (27%)
P53 78..258 CDD:176262 131/179 (73%)
Interaction with DNA. /evidence=ECO:0000250 242..249 6/6 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 251..302 16/50 (32%)
Bipartite nuclear localization signal. /evidence=ECO:0000250 275..297 8/21 (38%)
P53_tetramer 294..335 CDD:462238 19/40 (48%)
Oligomerization 302..333 17/30 (57%)
Nuclear export signal. /evidence=ECO:0000250 316..327 4/10 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..374 11/43 (26%)
Basic (repression of DNA-binding) 346..367 6/20 (30%)

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