DRSC/TRiP Functional Genomics Resources

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Protein Alignment TNS1 and ptn1

DIOPT Version :9

Sequence 1:XP_024308847.1 Gene:TNS1 / 7145 HGNCID:11973 Length:2005 Species:Homo sapiens
Sequence 2:NP_596312.1 Gene:ptn1 / 2541101 PomBaseID:SPBC609.02 Length:348 Species:Schizosaccharomyces pombe


Alignment Length:396 Identity:86/396 - (21%)
Similarity:148/396 - (37%) Gaps:115/396 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    82 NAPKNVVDKGEGASRGGNTRKSLEDNGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTER 146
            |..::||.:|         ||.|:..                   .|:|:.   ..||:||:|.:
pombe     2 NILRSVVSRG---------RKGLKQE-------------------KVNRSF---AYLDMVYITSK 35

Human   147 IIAVSFPSTANEENFRSNLREVAQMLKSKHGGNYLLFNLSERRPDITKLHAK-----VLEFGWPD 206
            :||:|.|:....:.:|::..:|.:.|.::...|::|.||....   |..|.:     |:.:|:.|
pombe    36 VIAMSTPAAGIHKLYRNDELDVFKYLTTQLKDNWILLNLCAEE---TVYHLELFKPNVINYGFQD 97

Human   207 LHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYM-HYSNISASADQALDRFA 270
            .:.|.|..:.:|...||......|...:|:|.|..:||.|.||.:|: .:..::|.  |:|:.:.
pombe    98 HNPPPLLFLWAIVMNMDALFQTQPLLTLVVHCKAGKGRTGTVICSYLVAFGGLTAK--QSLELYT 160

Human   271 MKRFYEDKIVPIGQPSQRRYVHY----------------------FSGLLSGSIKMNNKPLFLHH 313
            .||......:.|.  ||.|||:|                      |......:||.|:..:...|
pombe   161 EKRMVRGHGLTIS--SQIRYVYYIEILKQFPNYLKAVEFNTGTTFFKSFKCLNIKKNSSLILSLH 223

Human   314 VIMHG---------------IPNFESKGGCRPFLRIYQAMQPVYTSGIYNIPGDSQTSVCITIEP 363
            ....|               ..|...|.|.|                |:.|..:.:||     |.
pombe   224 AFSKGRNINPVALWKSSDISSHNVSIKEGKR----------------IWGIQCNLETS-----EK 267

Human   364 GLLL----KGDIL----LKC-YHKKFR----SPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFK 415
            .|||    ||...    ::| :|..|:    .....:.|:...::.......:.|...::|::.:
pombe   268 DLLLRVERKGQFYFPSSVQCWFHTHFQPMLVEYTNGINFQQGINSFLQGQQSISFSWSEMDNSRR 332

Human   416 DDRFPE 421
            .|.|.|
pombe   333 SDPFFE 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TNS1XP_024308847.1 None
ptn1NP_596312.1 CDC14 15..201 CDD:225297 51/214 (24%)
PTPc <78..179 CDD:304379 29/107 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2283
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm53652
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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