DRSC/TRiP Functional Genomics Resources

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Protein Alignment TNNT2 and tnt-3

DIOPT Version :9

Sequence 1:NP_001263274.1 Gene:TNNT2 / 7139 HGNCID:11949 Length:298 Species:Homo sapiens
Sequence 2:NP_001360657.1 Gene:tnt-3 / 181052 WormBaseID:WBGene00006588 Length:1235 Species:Caenorhabditis elegans


Alignment Length:301 Identity:89/301 - (29%)
Similarity:143/301 - (47%) Gaps:63/301 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    27 WRE--DEDEQEEAAEEDAEAE---AETEETRAEEDEEEEEAKEAEDGPMEESKPKPRSFMPNLVP 86
            ||.  .::|.||..||:.||:   :||:.||::                   :||.:||..:  .
 Worm   857 WRRRGTDEEVEEVDEEEVEADYAPSETDTTRSD-------------------RPKTKSFTED--E 900

Human    87 PKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSLKDRIERRRAERAEQQRIR 151
            ..:.:|||. .....|:..|:...:||...|.....|:||||||..||::.|:|:.||.::    
 Worm   901 EGLTEGERA-MAAAKRRHEEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQE---- 960

Human   152 NEREKERQNRLAEERARREEEE-------NRRKAEDEARKKKALSNMM----------------- 192
             |:|.|.:.|.|::|.|:||||       :||..|:|..||..||...                 
 Worm   961 -EKEMEERRRAADDRRRQEEEERKAKVDQDRRNREEEKNKKNQLSGFQTGGQGGRNFTVAKKAAQ 1024

Human   193 --HFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEA 255
              .||..:  ||:.|....|.|.|..|:..:.|.|:::.....:.:.:|:.|.|||.|.|..||.
 Worm  1025 NDKFGNIV--QAKQEMGMTKEQQEDAKRAFLAAIRKEIPNASEVPQSELKAKIKELHQRICKLET 1087

Human   256 EKFDLQEKFKQQKY---EINVLRNRINDNQKVSKTRGKAKV 293
            ||:||:::.::|:|   |:|..:.::..|..:.|....|:|
 Worm  1088 EKYDLEKRHERQEYDMKELNERQRQVTRNSALKKGIDPAEV 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TNNT2NP_001263274.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95 19/72 (26%)
Troponin 103..241 CDD:307228 48/163 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..219 41/124 (33%)
tnt-3NP_001360657.1 Troponin 1033..>1107 CDD:366404 25/73 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161465192
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11521
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.030

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