DRSC/TRiP Functional Genomics Resources

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Protein Alignment TSPAN7 and Tsp39D

DIOPT Version :9

Sequence 1:NP_004606.2 Gene:TSPAN7 / 7102 HGNCID:11854 Length:249 Species:Homo sapiens
Sequence 2:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster


Alignment Length:235 Identity:62/235 - (26%)
Similarity:111/235 - (47%) Gaps:21/235 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    12 ITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTNAPYVLIGTGTTIVVFGLFG 76
            :||:|.|....:.:|.:||:::..||...:|....|.:.::::...||.:|:..|..:.|....|
  Fly     6 LTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAVAVICFLG 70

Human    77 CFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFR---HEIKDTFLRTYTDAMQTYNGNDERS 138
            |....:.|..|:..:|:...::||.|:..|::|:|..   |:|.::   .:...||.|....:..
  Fly    71 CCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMES---QFNSTMQHYKERADYR 132

Human   139 RAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNETDCNPQDLHNLTVAA----TKVNQK 199
            .|...:|..|.|||:....:|.|  .:....:|.:||         .:.||:.|.    |...|.
  Fly   133 DAWTLLQTELDCCGINGPNDWET--VYRNSTLPAACC---------SVINLSEAKECTNTHATQH 186

Human   200 GCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSR 239
            ||...:...:::...|:|.|..|:|..|::.:|.||||.|
  Fly   187 GCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYR 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TSPAN7NP_004606.2 Tetraspannin 15..237 CDD:366035 57/228 (25%)
TM4SF2_6_like_LEL 110..213 CDD:239414 24/109 (22%)
Tsp39DNP_523612.3 Tetraspannin 8..227 CDD:278750 61/233 (26%)
tetraspanin_LEL 104..200 CDD:239401 24/109 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8510
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.770

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