DRSC/TRiP Functional Genomics Resources

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Protein Alignment NR2E1 and nr2e1

DIOPT Version :10

Sequence 1:NP_001273031.1 Gene:NR2E1 / 7101 HGNCID:7973 Length:422 Species:Homo sapiens
Sequence 2:NP_001003608.1 Gene:nr2e1 / 445214 ZFINID:ZDB-GENE-040801-127 Length:396 Species:Danio rerio


Alignment Length:393 Identity:348/393 - (88%)
Similarity:364/393 - (92%) Gaps:0/393 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    30 PLGSGLPWPSLLESPGGRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQ 94
            |.||......:|.....||||||||||||||||||||||||||||||||||||||||||||||.|
Zfish     4 PAGSTSGCLDILNVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGTQ 68

Human    95 GGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPS 159
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||::.||||
Zfish    69 GGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEVNGSSTHFPS 133

Human   160 AALPAPAFFTAVTQLEPHGLELAAVSTTPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCE 224
            .::|.|.|||.|||||||.|||..|::|||||.:|.||||||||||||:||||||||||||||||
Zfish   134 TSIPGPPFFTTVTQLEPHNLELNTVTSTPERQAIVGLAQPTPKYPHEVSGTPMYLYEVATESVCE 198

Human   225 SAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDN 289
            ||||||||||||||||||||||.|.|||:||||||||||||||||||||||::|||||||||.:|
Zfish   199 SAARLLFMSIKWAKSVPAFSTLPLPDQLILLEDAWRELFVLGIAQWAIPVDSSTLLAVSGMNTEN 263

Human   290 TDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAAL 354
            ||||:|||||||||||||||.||||||||||||||||||||||||||||||||||||||:|||||
Zfish   264 TDSQRLNKIISEIQALQEVVTRFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNASAIAAL 328

Human   355 QDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKS 419
            |||||||||||||||||||||||||||||||||||:.||||||||||||||||||||||||||||
Zfish   329 QDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSVGPSTIEEVFFKKTIGNVPITRLLSDMYKS 393

Human   420 SDI 422
            |||
Zfish   394 SDI 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NR2E1NP_001273031.1 NR_DBD_TLX 45..136 CDD:143537 87/90 (97%)
NR_LBD_Tlx_PNR_like 191..406 CDD:132748 198/214 (93%)
nr2e1NP_001003608.1 NR_DBD_TLX 19..110 CDD:143537 87/90 (97%)
NR_LBD_Tlx_PNR_like 165..380 CDD:132748 198/214 (93%)

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