DRSC/TRiP Functional Genomics Resources

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Protein Alignment NR2E1 and svp

DIOPT Version :10

Sequence 1:NP_001273031.1 Gene:NR2E1 / 7101 HGNCID:7973 Length:422 Species:Homo sapiens
Sequence 2:NP_001369011.1 Gene:svp / 41491 FlyBaseID:FBgn0003651 Length:826 Species:Drosophila melanogaster


Alignment Length:423 Identity:147/423 - (34%)
Similarity:216/423 - (51%) Gaps:82/423 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    28 GFPLGSGLPWPS-------LLESPGGRILD----IPCKVCGDRSSGKHYGVYACDGCSGFFKRSI 81
            |.|.|.|...||       ...|..|..:|    |.|.||||:|||||||.:.|:||..|||||:
  Fly   164 GQPTGCGSTTPSSQANSSHSQSSNSGSQIDSKQNIECVVCGDKSSGKHYGQFTCEGCKSFFKRSV 228

Human    82 RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTST------IRKQV 140
            |||.||.|:...  .||:|:.|||||:.|||||||::.|.::|||..|.|.|..      .:.|:
  Fly   229 RRNLTYSCRGSR--NCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQI 291

Human   141 A-------LYFRGHKEENGAAAHFPSAALPAPAFFTAVTQLEPHGLELAAVSTTPERQTLVSLAQ 198
            |       ..|.||..              ..::.:.:.:.||:                     
  Fly   292 ANGDPMGIAGFNGHSY--------------LSSYISLLLRAEPY--------------------- 321

Human   199 PTPKY-----PHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDA 258
            ||.:|     |:.:.|         .:::||.||||||.:::|||::|.|..|.:.||:.||...
  Fly   322 PTSRYGQCMQPNNIMG---------IDNICELAARLLFSAVEWAKNIPFFPELQVTDQVALLRLV 377

Human   259 WRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFA 323
            |.|||||..:|.::|:....|||.:|::.....:.::...:..|:..||.|.:.:.|.:|:.|::
  Fly   378 WSELFVLNASQCSMPLHVAPLLAAAGLHASPMAADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 442

Human   324 CLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALR 388
            |||.||.|.       ::.....:...|.:||:::|..|..|..|:||.||.|||||||.||:||
  Fly   443 CLKAIVLFT-------TDACGLSDVTHIESLQEKSQCALEEYCRTQYPNQPTRFGKLLLRLPSLR 500

Human   389 SISPSTIEEVFFKKTIGNVPITRLLSDMYKSSD 421
            ::|...||::||.:.:|..||..|:.||..|.:
  Fly   501 TVSSQVIEQLFFVRLVGKTPIETLIRDMLLSGN 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NR2E1NP_001273031.1 NR_DBD_TLX 45..136 CDD:143537 51/100 (51%)
NR_LBD_Tlx_PNR_like 191..406 CDD:132748 75/219 (34%)
svpNP_001369011.1 NR_DBD_COUP_TF 200..272 CDD:143516 44/73 (60%)
NR_LBD_COUP-TF 307..542 CDD:132746 84/278 (30%)

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