Sequence 1: | NP_612564.1 | Gene: | TLR4 / 7099 | HGNCID: | 11850 | Length: | 839 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262995.1 | Gene: | Tl / 43222 | FlyBaseID: | FBgn0262473 | Length: | 1117 | Species: | Drosophila melanogaster |
Alignment Length: | 906 | Identity: | 221/906 - (24%) |
---|---|---|---|
Similarity: | 352/906 - (38%) | Gaps: | 262/906 - (28%) |
- Green bases have known domain annotations that are detailed below.
Human 30 VEVVP--------NITYQCMELNFYK-IPDNLPFSTKNLD---LSFN--PLRHLGSYSFFSFPEL 80
Human 81 QVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFP 145
Human 146 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI------YCTDLRVLH----- 199
Human 200 ---QMPLLNLSLDLSLN-PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVL 260
Human 261 GEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSL---------- 315
Human 316 --VSVTIERVKDFS----------YNFGWQHLEL------VNCKFGQFPTL-------------K 349
Human 350 LKSLKRLTFTSN-KGGNAFSEVD----LPSLEFLDLSRNGLSFKGC-CSQSDFGTTSLKYLDLSF 408
Human 409 NGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 473
Human 474 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 538
Human 539 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN---------LTQNDFACTCEHQSFLQWI 594
Human 595 KDQRQLLVEVERMECATPSDKQGMPVLSLNITCQMNKTI-IGVSV---LSVLVVSVVAVLVYKF- 654
Human 655 -------YFHLMLLAGCIKYGRGENI-----YDAFVIYSSQDEDWVRNELVKNLEEGVPPFQLCL 707
Human 708 HYRDFIPGVAIAANIIHEGFHKSRKVIVVVSQHFIQSRWCIFEYEIAQTWQFLSSRAGIIFIV-- 770
Human 771 -LQKVEKTLLRQQVELYRLLSRNTYLEWEDSVLGRHIFWRRLRKALLDGKSWNPEGTVGTG 830 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TLR4 | NP_612564.1 | LRR_RI | 55..>195 | CDD:238064 | 40/150 (27%) |
LRR 1 | 55..76 | 9/25 (36%) | |||
leucine-rich repeat | 56..79 | CDD:275378 | 9/27 (33%) | ||
LRR_8 | 57..114 | CDD:290566 | 20/61 (33%) | ||
LRR 2 | 79..100 | 8/20 (40%) | |||
leucine-rich repeat | 80..103 | CDD:275378 | 7/22 (32%) | ||
LRR_8 | 102..187 | CDD:290566 | 21/84 (25%) | ||
LRR 3 | 103..124 | 3/20 (15%) | |||
leucine-rich repeat | 104..127 | CDD:275378 | 3/22 (14%) | ||
LRR 4 | 127..148 | 4/20 (20%) | |||
leucine-rich repeat | 128..176 | CDD:275378 | 13/47 (28%) | ||
leucine-rich repeat | 130..151 | CDD:275380 | 4/20 (20%) | ||
LRR 5 | 151..172 | 4/20 (20%) | |||
LRR_RI | 152..456 | CDD:238064 | 73/365 (20%) | ||
LRR 6 | 176..199 | 8/28 (29%) | |||
leucine-rich repeat | 177..190 | CDD:275378 | 4/12 (33%) | ||
leucine-rich repeat | 195..224 | CDD:275380 | 11/37 (30%) | ||
LRR 7 | 205..225 | 3/20 (15%) | |||
LRR 8 | 227..247 | 6/19 (32%) | |||
LRR 9 | 331..351 | 6/38 (16%) | |||
LRR 10 | 352..373 | 2/25 (8%) | |||
leucine-rich repeat | 353..374 | CDD:275380 | 2/25 (8%) | ||
LRR_RI | <372..581 | CDD:238064 | 49/218 (22%) | ||
LRR 11 | 374..394 | 7/20 (35%) | |||
LRR_8 | 399..458 | CDD:290566 | 13/58 (22%) | ||
LRR 12 | 400..422 | 4/21 (19%) | |||
leucine-rich repeat | 401..423 | CDD:275380 | 4/21 (19%) | ||
LRR 13 | 423..444 | 5/20 (25%) | |||
leucine-rich repeat | 424..448 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 447..508 | CDD:290566 | 14/60 (23%) | ||
LRR 14 | 448..456 | 2/7 (29%) | |||
leucine-rich repeat | 449..472 | CDD:275380 | 3/22 (14%) | ||
LRR 15 | 472..495 | 5/22 (23%) | |||
leucine-rich repeat | 473..497 | CDD:275380 | 4/23 (17%) | ||
LRR 16 | 497..518 | 7/20 (35%) | |||
leucine-rich repeat | 498..521 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 520..581 | CDD:290566 | 15/69 (22%) | ||
LRR 17 | 521..542 | 2/20 (10%) | |||
LRR 18 | 545..565 | 6/19 (32%) | |||
leucine-rich repeat | 546..570 | CDD:275380 | 7/23 (30%) | ||
LRRCT | 579..625 | CDD:214507 | 10/45 (22%) | ||
TIR | 674..815 | CDD:214587 | 54/143 (38%) | ||
Tl | NP_001262995.1 | LRR_8 | 174..233 | CDD:290566 | |
leucine-rich repeat | 176..198 | CDD:275380 | |||
leucine-rich repeat | 199..222 | CDD:275380 | |||
LRR_RI | 216..542 | CDD:238064 | 75/341 (22%) | ||
LRR_8 | 221..281 | CDD:290566 | 5/23 (22%) | ||
leucine-rich repeat | 223..270 | CDD:275380 | 2/12 (17%) | ||
leucine-rich repeat | 271..294 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 295..320 | CDD:275380 | 8/24 (33%) | ||
leucine-rich repeat | 321..343 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 342..402 | CDD:290566 | 11/59 (19%) | ||
leucine-rich repeat | 344..367 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 368..391 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 390..450 | CDD:290566 | 18/60 (30%) | ||
leucine-rich repeat | 392..415 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 416..439 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 440..474 | CDD:275380 | 11/40 (28%) | ||
leucine-rich repeat | 475..498 | CDD:275380 | 8/55 (15%) | ||
LRR_8 | 477..534 | CDD:290566 | 16/104 (15%) | ||
leucine-rich repeat | 499..520 | CDD:275380 | 6/35 (17%) | ||
leucine-rich repeat | 523..552 | CDD:275380 | 4/28 (14%) | ||
LRRCT | 561..619 | CDD:214507 | 7/57 (12%) | ||
LRRNT | 631..667 | CDD:214470 | 10/47 (21%) | ||
leucine-rich repeat | 664..693 | CDD:275380 | 10/44 (23%) | ||
LRR_8 | 669..726 | CDD:290566 | 25/120 (21%) | ||
leucine-rich repeat | 694..715 | CDD:275380 | 11/52 (21%) | ||
leucine-rich repeat | 716..737 | CDD:275380 | 9/46 (20%) | ||
LRRCT | 751..800 | CDD:214507 | 11/48 (23%) | ||
TIR | 858..996 | CDD:214587 | 56/147 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D147327at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24365 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.920 |