DRSC/TRiP Functional Genomics Resources

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Protein Alignment TIAL1 and Hrb87F

DIOPT Version :10

Sequence 1:NP_001029097.1 Gene:TIAL1 / 7073 HGNCID:11804 Length:392 Species:Homo sapiens
Sequence 2:NP_476806.2 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster


Alignment Length:349 Identity:79/349 - (22%)
Similarity:124/349 - (35%) Gaps:110/349 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    86 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMA 150
            ||....|:|:     |.|...:|       :|:|.|....|.:.:|:.|..:|.|.|..|:||..
  Fly     8 NGNYDDGEEI-----TEPEQLRK-------LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPK 60

Human   151 TGKSKGYGFVSF---YNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFED 212
            |.:|:|:||:::   |...:|:||..|.    :.||.:....|..:............|:|    
  Fly    61 TKRSRGFGFITYSQSYMIDNAQNARPHK----IDGRTVEPKRAVPRQEIDSPNAGATVKKL---- 117

Human   213 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK------GYSFVRFSTHESAA 271
                        :.||:.....::.:|:.|..||||:.:.:..:|      |::|:.|..::...
  Fly   118 ------------FVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVD 170

Human   272 HAIV----SVNGTTIEGHVVKCY-----------WGKESPDMTKNFQQVDYSQ----W------- 310
            ..|:    |:...|::  |.|..           .|:..|.......|.|..|    |       
  Fly   171 KIILQKTHSIKNKTLD--VKKAIAKQDMDRQGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQN 233

Human   311 --GQWSQV------------YGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMGG 361
              |.|...            :|..|..|   :.||. ...|..|.|||.||.|     :..|.||
  Fly   234 GGGNWGGAGGGGGFGNSGGNFGGGQGGG---SGGWN-QQGGSGGGPWNNQGGG-----NGGWNGG 289

Human   362 FGAQPPQGQAPPPVIPPPNQAGYG 385
            .|                  .|||
  Fly   290 GG------------------GGYG 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TIAL1NP_001029097.1 RRM1_TIAR 10..107 CDD:410028 6/20 (30%)
RRM2_TIAR 113..192 CDD:410029 25/81 (31%)
RRM3_TIAR 222..294 CDD:241064 18/92 (20%)
Hrb87FNP_476806.2 RRM1_hnRNPA_like 25..102 CDD:409992 26/87 (30%)
RRM_SF 116..188 CDD:473069 16/89 (18%)

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