DRSC/TRiP Functional Genomics Resources

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Protein Alignment TIAL1 and rump

DIOPT Version :10

Sequence 1:NP_001029097.1 Gene:TIAL1 / 7073 HGNCID:11804 Length:392 Species:Homo sapiens
Sequence 2:NP_649899.1 Gene:rump / 41138 FlyBaseID:FBgn0267790 Length:632 Species:Drosophila melanogaster


Alignment Length:86 Identity:22/86 - (25%)
Similarity:38/86 - (44%) Gaps:12/86 - (13%)


- Green bases have known domain annotations that are detailed below.


Human   104 SSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 168
            :|:|.||     :.:.::....|.:.::..|...|.:..|.:       :....|.|.|:.:.||
  Fly   558 ASRKSDT-----IIIKNVPITCTWQTLRDKFREIGDVKFAEI-------RGNDVGVVRFFKERDA 610

Human   169 ENAIVHMGGQWLGGRQIRTNW 189
            |.||..|.|..|.||.|:..:
  Fly   611 ELAIALMDGSRLDGRNIKVTY 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TIAL1NP_001029097.1 RRM1_TIAR 10..107 CDD:410028 1/2 (50%)
RRM2_TIAR 113..192 CDD:410029 18/77 (23%)
RRM3_TIAR 222..294 CDD:241064
rumpNP_649899.1 PABP-1234 48..435 CDD:130689
RRM1_hnRNPM_like 58..133 CDD:409819
RRM2_hnRNPM_like 234..307 CDD:409820
RRM_SF 565..629 CDD:473069 18/70 (26%)
Blue background indicates that the domain is not in the aligned region.

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